Table 1B.

Viral pathogens identification of the pooled HEp-2 culture collected from South/South East Asia 2010–2013.

A total of 105 hits with sequence reads identified viral pathogens from NCBI nt database (a total of 105 cells contain numbers) and 63 (63/105 (60%) were confirmed positive with RT-PCR and rRT-PCR. Viral pathogens: herpes simplex virus type 1 (HSV-1), mumps virus (MuV), enterovirus (EV), coxsackievirus (CV), echovirus (E), Human rhinovirus (hRV), influenza A H3N2 (IFV A), influenza B (IFV B), human parainfluenza (hPIVs), human adenovirus (HAdV-1), human coronavirus (HCoV) and human metapneumovirus (hMPV)). *Less than 4.0% identified reads were observed as carried over among neighbor sequenced samples. Grey highlights indicate PCR positive confirmation the presence of the indicated pathogens. Italic letters: No pathogens identified in the pools by PCR.