Table 3.
The secondary structure content, total surface area and residues contacts of MERS CoV S2 monomer and trimer before or after MD simulation.
| Monomer |
Trimer |
|||
|---|---|---|---|---|
| Before MD simulation | After MD simulation | Before MD simulation | After MD simulation | |
| Helix | 71.3 | 73.6 | 67.4 | 72.1 |
| Sheet | 0 | 0 | 0 | 0 |
| Turn | 3.2 | 6.2 | 5.2 | 2.1 |
| coil | 25.6 | 20.2 | 27.4 | 24.8 |
| Total surface area | 9564.72 | 7910.32 | 17022.02 | 17243.12 |
| Residue total contacts | 481 | 482 | 1741 | 1761 |