Table 3.
Overall Features of the Acinetobacter johnsonii Strain Acsw19 Genomic Islands
| GIs_id | Location (Start-End) |
Length (bp) |
G+C% | Closest Match in Genbank (Query Cover and Identity) |
Resistance Genes and Mobile Genes Carried |
|---|---|---|---|---|---|
| GI_Acsw19-1 | Chromosome (1,005,689–1,014,205) |
8,517 | 38.56 | Acinetobacter johnsonii strain M19 chromosome genome (99%, 98.97%) | None |
| GI_Acsw19-2 | Chromosome (1,533,242–1,543,640) |
10,399 | 39.81 | Acinetobacter johnsonii strain IC001 chromosome genome (96%98.97%) | IS3 family transposase |
| GI_Acsw19-3 | Chromosome (1,804,441–1,809,505) |
5,065 | 36.92 | Acinetobacter haemolyticus strain TJS01 chromosome genome (58%, 98.68%) | Integrase |
| GI_Acsw19-4 | Chromosome (1,816,879–1,835,718) |
18,840 | 39.44 | Acinetobacter sp. WCHA45 plasmid pNDM1_010045 (34%, 90.83%) | IS1, IS3 and three IS5 family transposase |
| GI_Acsw19-5 | Chromosome (1,886,561–1,897,546) |
10,986 | 34.84 | Acinetobacter johnsonii strain XBB1 chromosome genome (88%, 96.43%) | ISAha1 family transposase |
| GI_Acsw19-6 | Chromosome (1,919,728–1,925,691) |
5964 | 35.78 | Acinetobacter haemolyticus strain AN54 chromosome gemome (35%, 98.66%) | Two IS5 family transposases |
| GI_Acsw19-7 | Chromosome (2,033,708–2,038,927) |
5220 | 37.09 | Acinetobacter johnsonii strain XBB1 chromosome genome (26%, 85%) | None |
| GI_Acsw19-8 | Chromosome (2,531,192–2,545,937) |
1,4746 | 38.74 | Acinetobacter johnsonii strain M19 chromosome genome (99%, 96.27%) | IS5 family transposase |
| GI_Acsw19-9 | Chromosome (2,555,415–2,582,484) |
27,070 | 36.29 | Acinetobacter johnsonii strain LXL_C1 chromosome genome (79%, 99.09%) | Two IS3 family transposases, ISAha1 family transposase |
| GI_Acsw19-10 | Chromosome (2,586,932–2,600,597) |
13,666 | 39.02 | Acinetobacter sp. LoGeW2-3 chromosome, genome (70%, 92.78%) | Integrase |
| GI_Acsw19-11 | Chromosome (2,780,884–2,807,016) |
26,133 | 42.83 | Acinetobacter baumannii MRSN15313 chromosome genome (47%, 100%) | IS1 family transposase, Integrase, ISAba1, sul2, IS91-like transposase, aph(3")-Ib, aph(6)-Id, ISAba, floR |
| GI_Acsw19-12 | Chromosome (3,082,734–3,095,042) |
12,309 | 54.18 | Acinetobacter baumannii strain IOMTU 433 complete genome (96%, 100%) | IS91 family transposase, NDM-1 and Two ISAba125 |
| GI_Acsw19-13 | Chromosome (3,233,129–3,327,995) |
94,867 | 43.12 | Acinetobacter nosocomialis strain KAN01 chromosome genome (64%, 87.11%) | IS5 family transposase, Integrase |
| GI_Acsw19-14 | pAcsw19-2 (59,672–67,958) |
8287 | 32.59 | Acinetobacter sp. WCHA55 pOXA58_010055 (84%, 99.98%) | IS6-like transposase |
| GI_Acsw19-15 | pAcsw19-2 (293,855–301,112) |
7258 | 42.37 | Acinetobacter sp. WCHA55 pOXA58_010055 (99%, 100%), | IS4 family transposase |