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. 2018 Jan 24;218(7):1037–1044. doi: 10.1093/infdis/jiy036

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Figure 1. — Maximum likelihood phylogenetic tree depicting the relationship of the Dutch clinical isolate (hPPMV-1/NL/579/2003) with related avian paramyxovirus type 1 (APMV-1) strains based on analysis of full-length genomes. Assignment of APMV-1 genotypes (VIb/1 or VII) and sublineages (EUre1, EUre2, EUea1, or EUea2) was based on the studies of Ujvári et al [16] and Czegledi et al [35] and the sequence comparison shown in Table 1. GenBank accession numbers are given in parentheses: hPPMV-1/NL/579/2003 (KJ544861), Be/98–238/1998 (JX901109), Be/98–248/1998 (JX901110), WF CHK-guangzhou/2005 (HM063425), IE/806/2004 (JN986839), CH/waterhen/05 (HM063423), CH/SDLC/2011 (JQ979176), CH/LLN/110713 (JX486552), Be/07-04943/2007 (JX901121), Chi/SDS/2011 (JQ993431), Be/11-08304/2011 (JX901123), JS/07/03 (FJ766531), JS/07/22 (FJ766526), JS/07/16 (FJ766527), Be/11-07574/2011 (JX901122), JS/07/04 (FJ766530), CH/LGD/110947 (JX486556), CH/LGD/110945 (JX486555), IE/AV32419/1996 (GQ429292), CH/LJL/100605 (JX486551), CH/LHLJ/110813 (JX486553), CH/LGD/110208 (JX486550), CH/LHLJ/110822 (JX486554), CH/LJL/120404 (JX486557), IT/273620/2000 (GQ429293), USA/0607/2006 (KC013033), IT/227/1982 (AJ880277), USA/0704/2007 (KC013034), USA/0810/2008 (KC013038), USA/0719/2007 (KC013036), USA/0717/2007 (KC013035), USA/0805/2008 (KC013037), USA/NY/1984 (FJ410145), USA/ML/1984 (FJ410147), IT/2736/2000 (AY562989), APMV-1/NL/152608/1993 (JN986837).