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. 2018 Jun 28;67(6):e1–e94. doi: 10.1093/cid/ciy381

Table 11.

Laboratory Diagnosis of Periocular Structure Infections/Conjunctivitis, Orbital and Periorbital Cellulitis, and Lacrimal and Eyelid Infections

Etiologic Agents Diagnostic Procedures Optimum Specimens Transport Issues and Optimal Transport Time
Bacteria
 Haemophilus influenzae
 Streptococcus pneumoniae
 Staphylococcus aureus
 Moraxella catarrhalis and other spp
 Streptococcus pyogenes
 Escherichia coli
Other Enterobacteriaceae
 Neisseria gonorrhoeae
Gram stain
Aerobic bacterial culture
Conjunctival swab Swab transport device, RT, 2 h
 Actinomyces spp
Other anaerobic bacteria (rare cause of canaliculitis)
Anaerobic bacterial culture Conjunctival scraping or biopsy Sterile anaerobic container, RT, immediately
 Chlamydia trachomatis Direct fluorescent antibody stain
NAATa,b
Conjunctival swab Virus swab transport device, RT, 2 h
Viruses
HSV HSV NAAT
HSV culture
Conjunctival swab Virus swab transport device, RT, 2 h
VZV VZV NAAT Conjunctival swab Virus swab transport device, RT, 2 h
Adenovirus Adenovirus NAAT Conjunctival swab Virus swab transport device, RT, 2 h
Herpes B virus c

Abbreviations: HSV, herpes simplex virus; NAAT, nucleic acid amplification test; RT, room temperature; VZV, varicella zoster virus.

aNAATs for detection of C. trachomatis have not yet been approved in the United States for use with conjunctival swab specimens. Individual laboratories, however, may have validated NAATs for examination of specimens obtained from patients with conjunctivitis, and studies suggest that NAATs are more sensitive than cultures.

bUse of NAAT for detection of C. trachomatis is considered an “off-label” use of this test. Laboratories that offer such testing must conduct in-house validation of these assays before offering NAAT as a diagnostic test.

cCulturing of specimens thought to harbor herpes B virus (primate origin) requires use of biosafety level 4 precautions in the laboratory, and testing is almost always referred to a specialized reference laboratory. Consult the laboratory when herpes B virus is suspected.