TABLE 4.
Sequence variability analysis at the seven positions in RRV nsP1 and nsP2 across the isolates
| RRV type | nsP1 186 | nsP1 402 | nsP1 522 | nsP2 31 | nsP2 219 | nsP2 580 | nsP2 619 |
|---|---|---|---|---|---|---|---|
| RRV-T48 | V | E | R | A | N | S | Q |
| RRV 2548 | A | A | Q | T | T | L | R |
| RRV-1959-T48 | V | E | R | A | N | S | Q |
| RRV-2975 | V | E | R | A | N | S | Q |
| RRV-3078 | V | E | R | A | N | S | Q |
| RRV-2982 | V | E | R | A | N | S | Q |
| RRV-14389 | V | E | R | A | N | S | R |
| RRV-9057 | V | E | R | A | N | S | R |
| RRV-8961 | V | E | R | A | N | S | R |
| RRV-K3011 | V | E | R | T | N | S | Q |
| RRV-1503 | V | E | R | T | N | S | Q |
| RRV-SW38788 | V | E | R | T | N | S | Q |
| RRV-SW24336 | V | E | R | T | N | S | Q |
| RRV-SW12358 | V | E | R | T | N | S | Q |
| RRV-SW11747 | V | E | R | T | N | S | Q |
| RRV-SW3181 | V | E | R | T | N | S | Q |
| RRV-NB5092 | V | E | Q | T | N | S | R |
| RRV-NC_001511 | V | E | Q | T | N | S | R |
| RRV-PW14 | A | E | Q | T | N | L | R |
| RRV-MIDI13 | A | E | Q | T | N | L | R |
| RRV-MIDI86 | A | E | Q | T | N | L | R |
| RRV-MIDI32 | A | E | Q | T | N | L | R |
| RRV-TT | A | E | Q | T | N | L | R |
| RRV-QML 1 | A | E | Q | T | N | L | R |
| RRV-P6179 | A | E | Q | T | N | L | R |
| RRV-P1373 | A | E | Q | T | N | L | R |
| RRV-P42273 | A | E | Q | T | T | L | R |
| RRV-P42213 | A | E | Q | T | T | L | R |
| RRV-P42161 | A | E | Q | T | T | L | R |
| RRV-P42134 | A | E | Q | T | T | L | R |
| RRV-P42115 | A | E | Q | T | T | L | R |
| RRV-K2505 | A | E | Q | T | T | L | R |