Table 2.
Basic population demographic characteristics of 9 TCGA cancer cohorts.
| STAD N = 85 |
LIHC N = 81 |
COAD N = 88 |
READ N = 18 |
LUSC N = 221 |
LUAD N = 148 |
HNSC N = 69 |
CESC N = 8 |
BLCA N = 28 |
Totals N = 746 |
|
|---|---|---|---|---|---|---|---|---|---|---|
| Race N (%) | ||||||||||
| White | 54 (64) | 64 (79) | 37 (42) | 8 (44) | 147 (67) | 120 (8) | 56 (81) | 4 (50) | 25 (89) | 515 (69) |
| African American | 3 (3) | 6 (7) | 7 (8) | 1 (6) | 16 (7) | 23 (16) | 9 (13) | 1 (13) | 2 (7) | 68 (9) |
| Asian | 16 (19) | 7 (9) | – | – | 3 (1) | 2 (1) | 1 (1) | – | – | 29 (4) |
| Other Race | – | – | 1 (1) | – | – | 1 (1) | – | 2 (25) | – | 4 (1) |
| Not reported | 12 (14) | 4 (5) | 43 (49) | 9 (50) | 55 (25) | 2 (1) | 3 (4) | 1 (13) | 1 (4) | 130 (17) |
| Age at diagnosis | ||||||||||
| Mean ±SD Range | 67 ± 10.5 41–88 |
64 ± 14.7 20–86 |
71 ± 12.3 40–90 |
63 ± 14.6 40–90 |
68 ±8.4 40–85 |
65 ± 10.3 40–87 |
63 ± 12.2 26–88 |
47 ± 13.5 22–69 |
69 ± 10.7 48–90 |
64 ± 11.9 20–90 |
| Sex N (%) | ||||||||||
| Male | 48 (56) | 46 (57) | 47 (53) | 7 (39) | 64 (29) | 63 (43) | 48 (70) | – | 19 (68) | 342 (46) |
| female | 37 (44) | 35 (43) | 41 (47) | 11 (61) | 157 (71) | 85 (57) | 21 (30) | 8 (100) | 9 (32) | 404 (54) |
| Stage N (%) | ||||||||||
| I | 14 (17) | 33 (41) | 11 (13) | 4 (22) | 121 (55) | 79 (53) | 1 (1) | 4 (50) | 3 (11) | 270 (36) |
| II-III | 47 (55) | 35 (43) | 62 (70) | 9 (50) | 96 (43) | 61 (41) | 30 (43) | 4 (50) | 11 (39) | 355 (48) |
| IV | 8 (9) | 3 (4) | 14 (16) | 4 (22) | 3 (1) | 6 (4) | 38 (55) | – | 14 (50) | 90 (12) |
| No staging | 16 (19) | 10 (12) | 1 (1) | 1 (6) | 1 (1) | 2 (1) | – | – | – | 31 (4) |
Cases with paired tumor and adjacent tissue normal with available clinical data Clinical. Out of 798 cases, with bacterial presence, clinical data was available for 746. Largest fraction of cases without clinical data were from LUAD (n = 52). Other race include groups with 2 or less cases per group from Native American, Alaskan Native, Native Hawaiian or other Pacific Islander to maintain privacy. (–) indicates not available or not applicable