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. 2018 Jan 31;69:1–7. doi: 10.1016/j.ijid.2018.01.012

Table 1.

Primers and probe used for Bocavirus real-time PCR.

Target Sequence (5′ → 3′) Function Product size Primer source
HBoV CACKCCCAGGAARTGACGTAT Forward primer 118 bp This study
3′ non-coding region CCAGAGATGTTCACTCGCCGGA Reverse primer
TCAGACTGCATCCGGTCTa Probe

Platinum ® Quantitative PCR SuperMix-UDG Invitrogen enzyme (Cat.No. 11730-005) was used for PCR amplification of the above targets in a monoplex format in a final 25ul volume reaction (containing 20 ul of master mix and 5ul of nucleic acid extract) with 3 mM MgCl2, 400 nM primers and 120 nM probe concentration.

Cycling conditions were 50 °C for 2 min, 95 °C for 2 min, 40 cycles at 95 °C for 15 s and 60 °C for 1 min and acquiring on FAM for both assays.

a

 = MGB probe. Fluorophore = FAM, Quencher = NFQ (Life technologies).