Table 3.
Comparisons of representative orthomyxovirus proteins. Within each box are: segment number arranged by total nucleotide length, number of amino acids in the open reading frame and calculated pI values. Within parentheses is the number of potential N-linked glycosylation sites, determined by having amino acid sequences N-X-S/T-X, where X is not a proline. na = not available.
| Protein abbreviation | RbtOV-1 345/97 | ISAV Glesvaer/2/90 | Influenza A/PR/8/34 | Influenza B/Lee/40 | Influenza C/Ann Arbor/1/50 | Thogoto Si Ar 126 |
|---|---|---|---|---|---|---|
| PB2 | 1 727aa 9.0 |
1 722aa 8.4 |
1 759aa 9.6 |
1 770aa 9.4 |
1 774aa 9.3 |
1 769aa 9.0 |
| PB1 | 2 701aa 6.9 |
2 708aa 9.3 |
2 757aa 9.5 |
2 752aa 9.1 |
2 754aa 9.0 |
2 710aa 7.9 |
| NP | 3 638aa 8.7 |
3 616aa 8.3 |
5 498aa 9.5 |
5 560aa 9.4 |
5 565aa 9.6 |
5 454aa 9.4 |
| PA | 4 588aa 8.6 |
4 578aa 7.1 |
3 716aa 5.2 |
3 726aa 5.4 |
3 709aa 7.8 |
3 622aa 5.7 |
| NA-F | 5 480aa 6.0 (4) |
5 F 444aa 7.4 (2) |
6 455aa 8.1 (5) |
6 466aa 7.0 (4) |
na | na |
| HA-HE | 6 464aa 5.1 (6) |
6 HE 391aa 8.6 (2) |
4 566aa 7.5 (7) |
4 584aa 8.0 (10) |
4 HEF 655aa 5.9 (8) |
4 G75 512aa 5.8 (5) |
| NS1 | 7 306aa 8.8 (1) |
7 300aa 5.9 (1) |
8 230aa 6.2 (1) |
8 281aa 5.9 (5) |
7 246aa 9.2 (1) |
na |
| NEP | 7 143aa 4.4 (1) |
7 159aa 4.4 (1) |
8 121aa 5.0 (0) |
8 122aa 6.4 (2) |
7 182aa 8.1 (2) |
na |
| M1 | 8 207aa 9.4 (3) |
8 196aa 9.2 (1) |
7 252aa 9.7 (0) |
7 M 248aa 9.3 (1) |
6 M 242aa 9.3 (2) |
6 M 266aa 6.6 (1) |
| M2 | 8 235aa 9.4 (1) |
8 241aa 5.6 (2) |
7 97aa 5.6 (1) |
7 BM2 109aa 5.7 (0) |
6 CM2 139aa 4.4 (1) |
6 ML 304aa 5.2 (1) |