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. 2020 Apr 14;9:145. Originally published 2020 Feb 25. [Version 2] doi: 10.12688/f1000research.22507.2

Table 4. 2019-nCoV 9-mer peptides with geometric mean ≥ 0.7 by 1G4 TCR positional weight matrix and predicted positive to bind HLA-A*02:01 by NetMHCpan 4.0 (Rank = NetMHCpan rank).

Peptide Binding score Activation score Killing score geoMean Rank Binder
RIMTWLDMV 0.866377428 0.853995 0.776303 0.831249 0.3481 SB
ALNTLVKQL 0.802453741 0.75073 0.785957 0.779413 0.6159 WB
LLLDRLNQL 0.809895414 0.7752 0.741096 0.774888 0.0423 SB
MIAQYTSAL 0.766262499 0.789511 0.749477 0.768242 0.9238 WB
VLSTFISAA 0.799672451 0.756117 0.687278 0.746239 0.536 WB
NVLAWLYAA 0.761297552 0.686117 0.739944 0.728423 1.4457 WB
RLANECAQV 0.783161706 0.719705 0.680504 0.726572 0.2049 SB
KLLKSIAAT 0.748896679 0.708996 0.697463 0.718118 1.0923 WB
QLSLPVLQV 0.70128376 0.715259 0.708405 0.708293 0.4768 SB
VQMAPISAM 0.729320768 0.698514 0.689612 0.705612 1.4677 WB
LLLTILTSL 0.7131709 0.715194 0.680064 0.702623 0.2712 SB
SVLLFLAFV 0.736972762 0.690855 0.679534 0.70202 1.1449 WB
LMWLIINLV 0.727847374 0.681119 0.694007 0.700717 1.304 WB