Table 5. 2019-nCoV 9-mer peptides having leucine-valine in anchor positions.
Peptides have geometric mean ≥ 0.6 and ≤ 0.7 (for those ≥ 0.7, refer to Table 4) by 1G4 TCR positional weight matrix and predicted positive for HLA-A*02:01 binding by NetMHCpan 4.0 (Rank = NetMHCpan rank).
Peptide | Binding score | Activation score | Killing score | geoMean | Rank | Binder |
---|---|---|---|---|---|---|
TLMNVLTLV | 0.723687 | 0.658986 | 0.652178 | 0.677534 | 0.0444 | SB |
QLEMELTPV | 0.711291 | 0.651003 | 0.608605 | 0.655625 | 1.6769 | WB |
MLAKALRKV | 0.668756 | 0.610664 | 0.65968 | 0.645854 | 0.3524 | SB |
GLFKDCSKV | 0.675952 | 0.632375 | 0.594753 | 0.633494 | 0.2677 | SB |
ALSKGVHFV | 0.652549 | 0.604952 | 0.586236 | 0.613954 | 0.0425 | SB |
YLNTLTLAV | 0.624147 | 0.610826 | 0.575445 | 0.603119 | 0.0453 | SB |