Table 1:

Genome assembly and annotation statistics for GSD assembly vs CanFam3.1

Statistic	GSD	CanFam3.1
Total sequence length	2,407,291,559	2,410,976,875
Total ungapped length	2,401,147,102	2,392,715,236
No. of contigs	735	27,106
Contig N50	20,914,347	267,478
Contig L50	37	2,436
No. of scaffolds	410	3,268
Scaffold N50	64,346,267	63,241,923
Scaffold L50	15	15
No. of gaps	306	23,876
BUSCO complete (genome)	93.0% (91.6% single copy, 1.4% duplicate copy)	92.2% (91.1% single copy, 1.1% duplicate copy)
BUSCO fragmented (genome)	3.6%	4.0%
BUSCO missing (genome)	3.4%	3.8%
BUSCO complete (annotation)	98.9% (96.5% single copy, 2.4% duplicate copy)	95.1% (94.1% single copy, 1.0% duplicate copy)
BUSCO fragmented (annotation)	1.0%	1.9%
BUSCO missing (annotation)	0.1%	3.0%