Table 3.
The percentage of nucleotides and amino acids differences in NS3 between CnNPHV variants in UK dogs identified in this study and equine reference strains from different geographical locations.
| Species | USA | UK | Germany | Brazil | ||||
|---|---|---|---|---|---|---|---|---|
| Accession numbers |
JQ434001, JQ434003 and JQ434006, |
JX948118 and JX948121 |
KC411810 and KC411811 |
KJ469459 and KJ469466 |
||||
| Tissue types | Nucleotides | Amino acids | Nucleotides | Amino acids | Nucleotides | Amino acids | Nucleotides | Amino acids |
| Trachea | 89.6–100 | 90.9–100 | 83.6–89.6 | 89.0–98.1 | 87.8–90.9 | 89.0–98.1 | 83.6–89.6 | 89.0–100 |
| Lung | 91.5–100 | 96.3–100 | 85.4–87.8 | 96.3–98.1 | 89.6–90.9 | 96.3–98.1 | 85.4–89.6 | 96.3–100 |
| Liver | 90.9–100 | 94.5–100 | 85.4–87.8 | 94.5–98.1 | 89.0–90.9 | 94.5–98.1 | 84.8–89.6 | 94.5–98.1 |
| Overall | 89.6–100 | 90.9–100 | 83.6–89.6 | 89.0–98.1 | 87.8–90.9 | 89.0–98.1 | 83.6–89.6 | 89.0–100 |