Table 1.
Oligonucleotide primers for full genome amplification of South Polar skua adenovirus.
Gene | Primer | Nucleotide sequence (5′–3′) | Polarity |
---|---|---|---|
ITR | Adv-ITR_EcoR I | 5′-GAA TTC CA ATC AAT ATA TAT ACC-3′ | +/− |
IVa2 | Adv-IVa2R2926 | 5′-ACC TAG ATA TCA ACA ATG A-3′ | − |
Polymerase | Adv-polR VI | 5′-CTG TCK GTR TCD CCA TA-3′ | + |
Adv-PolFouter_ku | 5′-TCM GAG GBG GAC GAT GYT ACC C-3′ | − | |
Adv-Pol707R | 5′-GAT ACC CAA CTC AAC TAG CA-3′ | − | |
Adv-PolF4052 | 5′-TCG TCA GAG TAT AGA TAG TC-3′ | + | |
Adv-PolR3452 | 5′-TAC AGG AAT TCG AAG AT-3′ | − | |
Adv-PolF3992 | 5′-AGA CTG TCA GTA TCA-3′ | + | |
pTP | Adv-ptp6783R | 5′-ACT AAG AGC ACC AAG ATG A-3′ | − |
Adv-ptp68F | 5′-TAC TTG TGG TAA CTA GA-3′ | + | |
52K | Adv-52K8696R | 5′-TCT CCA TTT GCT CAG TA-3′ | − |
Adv-52K9279F | 5′-TAG GTG TAC AAA CTA GA-3′ | + | |
Penton base | Adv-Pen11161R | 5′-GAA TGA TCT TTA TCC TGA T-3′ | − |
Adv-Pen241F | 5′-GAT AAC AAG GCV ADT GAT AT-3′ | + | |
Adv-Pen597R | 5′-TCA ATA ADC TCA TT-3′ | − | |
Adv-Pen869F | 5′-ATT RAR TAT GAT GA-3′ | + | |
Hexon | Adv-Hex13700R | 5′-AAT CTA CGA GAT TCT CTG A-3′ | − |
Adv-Hex16F | 5′-ATG GAY ATW TCA AAT GCT AC-3′ | + | |
Adv-Hex409R | 5′-ATT GAG CTG ACC TTG GAG C-3′ | − | |
Adv-Hex1159F | 5′-TGG AAY CAA GCT GTW GA-3′ | + | |
DBP | Adv-DBP17732F | 5′-ATG GAA GCA TCT GA-3′ | + |
100K | Adv-100K19311R | 5′-ATG CTG TCA ACC AT-3′ | − |
Adv-100K19813F | 5′-AGC TTT ACA CAA TGA-3′ | + | |
Adv-100K19278F | 5′-TGA ATG ATG GTG AAG A-3′ | + | |
Adv-100K19995R | 5′-TTC TCA GGA TAA TCC A-3′ | − | |
E3 | Adv-E3R21725 | 5′-ACA CAA GCT GAA GCA-3′ | − |
Adv-E3F21275 | 5′-TAC AGG AGG AGC TCT GT-3′ | + | |
Fiber | Adv-Fiber23068R | 5′-ATC CAA GAC CAT TAC CAA-3′ | − |
Adv-Fiber23030F | 5′-GTG GTA TGC TTA GTT TGA-3′ | + |