Table 1. Summary of the genomic features of the TEN strains Iraq B and Bosnia A.
Genome parameter | TEN Iraq B | TEN Bosnia A |
---|---|---|
GenBank Accession No. | CP032303.1 | CP007548.1 |
Genome size | 1,137,653 bp | 1,137,653 bp |
G+C content | 52.77% | 52.77% |
No. of predicted genes | 1125 including 54 untranslated genes | 1125 including 54 untranslated genes |
Sum of the intergenic region length (% of the genome length) | 52,289 bp (4.60%) | 52,643 bp (4.63%) |
Average/median gene length | 978.8/831.0 bp | 979.2/831.0 bp |
No. of genes encoded on plus/minus DNA strand | 600/525 | 600/525 |
No. of annotated pseudogenes | 19* | 15** |
No. of tRNA loci | 45 | 45 |
No. of rRNA loci | 6 (2 operons) | 6 (2 operons) |
No. of ncRNAs | 3 | 3 |
*Pseudogenes comprised those identified during comparison of the sequence of TEN Iraq B with TEN Bosnia A sequence (TP0146, TP0279, TP0461, TP0479, TP0520, TP0532, TP0812, TP0865, TP1029 and TP1031) and those identified during comparison with TPA Nichols and TPE Samoa D sequences (TP0082a, TP0129, TP0132, TP0135, TP0266, TP0318, TP0370, TP0671 and TP1030).
**Pseudogenes annotated in the sequence of TEN Bosnia A resulted either from comparison with TPE Samoa D sequence (TP0082a, TP0146, TP0316, TP0370, TP0520, TP0532, TP0812, TP1029) or with TPA Nichols sequence (TP0129, TP0132, TP0135, TP0266, TP0318, TP0671 and TP1030).