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. 2006 Sep 5;101(1):89–94. doi: 10.1016/j.jinorgbio.2006.08.013

Table 2.

Binding site and H-bond formation (H-bond length: Å)

Complex 3CLpro residue Ligand atom Distance
1,2-PTi2/3CLpro A46:O O11 2.29
A145:O O16 2.75
A164:O O22 1.75
A41:ND1 O22 2.87
A41:ND1 O23 1.40
A41:ND1 O25 2.56
A189:OE1 O28 0.76
A26:O O41 1.96



1,4-PTi2/3CLpro A166:O O6 2.04
A41:HE2 O20 2.11
A166:OE2 O44 2.98
A41:ND1 O47 2.35
A143:O O50 1.84
A145:HN O50 2.47



1,11-PTi2/3CLpro A25:OG1 O12 1.47
A41:O O12 2.96
A26:O O19 2.51
A187:O O22 2.92
A166:O O27 2.86
A142:OD1 O42 2.51



1,5-PTi2/3CLpro A119:OD1 O9 2.37
A145:HN O9 2.13
A166:OE1 O19 1.39
A26:O O22 1.44
A46:O O29 1.69
A41:O O36 1.48
A164:O O39 1.92
A166:O O42 2.76
A41:HE2 O43 2.07



1,6-PTi2/3CLpro A25:O O45 2.28
A26:O O52 2.13
A26:HN O39 0.67
A41:O O50 2.53
A41:ND1 O42 2.65
A41:HE2 O33 1.96
A44:O O47 2.93
A142:O O48 2.84