Fig. 4.

The ORFs phylogenetics trees.

(A–B) Phylogenetics analysis of nucleotide sequences of ORF1a and ORF1b were performed with neighbor-joining method, Junkes Cantor genetic distance model. (C) While the capsid phylogenetic tree was reconstructed using amino acid sequences with Jones-Taylor-Thornton (JTT) model Gamma distribution with invariant site (G + I) were applied to both inferences. The percentage of replicate trees in which the associated taxa are grouped in the bootstrap test (1000 replicates) is shown next to the branches. GenBank accession numbers are listed for all sequences analyzed in the tree. The crab-eating fox/2016/BRA sequence is labeled with a black diamond (♦).