Table 2.
Selective pressure analyses of mammal IGHC genes by site model.
| Gene | Models | -lnLa | P value | M8 ω value | Positively Select Sitesb(P > 0.90) |
|---|---|---|---|---|---|
| IGHA | M8 | 10704.474 | 2.045 | 7 T 0.997; 203 A 0.937; 213 A 1.000; 237 R 1.000; 254 T 0.961; 321 N 0.977 | |
| M8a | 10716.250 | <0.001 | |||
| IGHE | M8 | 13389.996 | 0.065 | 1.371 | |
| M8a | 13391.701 | ||||
| IGHM | M8 | 14298.945 | 0.006 | 1.888 | 3 P 0.946; 101 Q 0.974; 294 L 0.990 |
| M8a | 14302.713 | ||||
lnL is the log-likelihood score.
PPs of Bayes Empirical Bayes (BEB) analysis with P > 0.9 was regarded as candidates for selection.