Table 3.
Virus detection in tracheal swabs from experimentally infected chickens.
Direct analysisa |
Allantoic fluid PIb |
VI | |||
---|---|---|---|---|---|
RT-PCRc | RRT-PCR | RT-PCR | RRT-PCR | ||
Variant 1 | 6/12 | 9/12 | 6/12 | 10/12 | 11/12 |
IS/885/00 | 0/12 | 9/12 | 3/12 | 12/12 | 9/12 |
IS/1201/04 | 4/12 | 6/12 | 9/12 | 10/12 | 12/12 |
Non-infected | 0/12 | 3/12 | 1/10 | 3/12 | 3/12 |
RNA extraction from tracheal swabs sampled five days post-inoculation (PI).
RNA extraction from allantoic fluid harvested 48 h PI.
RT-PCR targeting the S1 gene.