Table 1.
Amplicon | Primer | Polarity | Nucleotide sequence | Position of the 5′-base |
---|---|---|---|---|
HBV S gene | S6C | Sense | 5′-gca cac gga att ccg agg act ggg gac cct g-3′ | 129a |
S7D | Antisense | 5′-gac acc aag ctt ggt tag ggt tta aat gta tac c-3′ | 842a | |
HBV C gene | HcNCO | Sense | 5′-acc atg gac att gac cct tat aaa g-3′ | 1901a |
Hc-149s | Antisense | 5′-agg atc caa caa cag tag ttt ccg g-3′ | 2348a | |
HBc-EV1 | Sense | 5′-gga tat cat gga cat cga ccc tta t-3′ | 1901a | |
HBc-EV2 | Antisense | 5′-act cga gac att gag att ccc gag a-3′ | 2451a | |
HBV preC/C | HpreC-EV1 | Sense | 5′-gga tat cat gca act ttt tca cct ctg-3′ | 1814a |
HBc-EV2 | Antisense | 5′-act cga gac att gag att ccc gag a-3′ | 2451a | |
STAT1 | STAT1-1 | Sense | 5′-cca tgg aaa tca gac agt acc tgg c-3′ | 431b |
STAT1-3 | Antisense | 5′-cct tca cat ttc tga ctt tac tgt c-3′ | 802b | |
ISG15 | ISG15k | Sense | 5′-gac ctg acg gtg aag atg ctg g-3′ | 84c |
ISG15k-2 | Antisense | 5′-ttc ctc acc agg atg ctc aga gg-3′ | 337c | |
β-Actin | A-1 | Sense | 5′-tgg aat cct gtg gca tcc atg aaa c-3′ | 879d |
A-2 | Antisense | 5′-taa aac gca gct cag taa cag tcc g-3′ | 1224d |
The italicized parts of primers S6C, S7D, HcNCO, Hc-149s, HBc-EV1, HpreC-EV1, and HBc-EV2 indicate the specific cleavage sites of restriction enzymes EcoRI, HindIII, NcoI, BamHI, EcoRV, and XhoI, respectively.
Numbering of the sequence is according to U95551.
Numbering of the sequence is according to NM_007315.2.
Numbering of the sequence is according to XM_010527.
Numbering of the sequence is according to NM_001101.2.