Table 2.
Sequences of primers used for HIV-1 RT-LAMP.
| Primer name | Sequence | Genome positiona |
|---|---|---|
| F3 | 5′-GGTAAGAGATCAGGCTGAACATC-3′ | 4721–4743 |
| F2 | 5′-AGACAGCAGTACAAATGGCA-3′ | 4747–4766 |
| Loop F | 5′-TTAAAATTGTGGATGAAT-3′ | 4786–4769 |
| F1c | 5′-CCCCAATCCCCCCTTTTCTT-3′ | 4806–4787 |
| B1c | 5′-AGTGCAGGGGAAAGAATAGTAGAC-3′ | 4812–4835 |
| Loop B | 5′-GCAACAGACATACAAACTAAAG-3′ | 4842–4863 |
| B2 | 5′-CTGCTGTCCCTGTAATAAACCC-3′ | 4921–4900 |
| B3 | 5′-GCTGGTCCTTTCCAAAGTGG-3′ | 4945–4926 |
| FIP | F1c + F2 | |
| BIP | B1c + B2 | |
In HIV-1HXB2.