Supplementary Table 3. The biological information and function prediction of three tagSNPs of ACTB gene.
No | SNP | Chromosome | Position | Allele | LDsnp | Pop/LD | TFBS | RegPotential | Conservation | Nearby Gene | Distance (bp) |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | rs852426 | 7 | 5532879 | T/C | rs852426 | 1 | -- | 0 | 0.002 | MIRN589||ACTB | −30806||−433 |
2 | rs852423 | 7 | 5534892 | A/G | rs852423 | 1 | -- | 0.266 | 0 | ACTB | 1580||1855 |
3 | rs2966449 | 7 | 5538151 | T/C | rs2966449 | 1 | Msx-1 | 0.135 | 0 | ACTB||FSCN1 | −1404||−60829 |
TFBS, transcription factor binding site; RegPotential, regulatory potential score.