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. 2020 Mar 26;11:221. doi: 10.3389/fgene.2020.00221

TABLE 1.

Classification of HLA-superalleles in to SF and SU on the basis of mean OS difference.

HLA superalleles #No. of Samples #Mean OS Mean Diff OS (P-A) P-value Risk status


Present (P) Absent (A) Present (P) Absent (A)
HLA-B*55 16 385 94.58 58.46 36.12 0.002 graphic file with name fgene-11-00221-i000.jpg
HLA-DPB1*01 34 367 87.51 57.34 30.17 6.82E-07
HLA-B*08 80 321 81.09 54.62 26.47 6.36E-14
HLA-DRB1*03 85 316 80.14 54.46 25.69 2.29E-14
HLA-B*49 11 390 77.87 59.39 18.48 0.037
HLA-A*01 115 286 72.88 54.68 18.2 1.24E-17
HLA-C*05 61 340 72.74 57.6 15.15 1.82E-12
HLA-DPB1*10 16 385 72.87 59.36 13.51 0.0004
HLA-C*07 217 184 66.01 52.7 13.31 3.65E-31
HLA-B*14 27 374 48.34 60.74 –12.39 2.20E-05 graphic file with name fgene-11-00221-i001.jpg
HLA-A*24 81 320 48.59 62.77 –14.18 5.61E-13
HLA-DPB1*05 17 384 46.26 60.51 –14.25 0.001
HLA-A*31 26 375 46.34 60.84 –14.5 1.76E-05
HLA-DPB1*11 10 391 45.32 60.27 –14.95 0.003
HLA-DRB1*07 103 298 48.37 63.89 –15.51 4.31E-14
HLA-DPB1*06 12 389 43.68 60.4 –16.72 0.014
HLA-C*14 10 391 43.44 60.32 –16.88 0.003
HLA-B*18 39 362 44.41 61.57 –17.16 1.07E-08
HLA-C*01 42 359 44.35 61.72 –17.37 9.08E-07
HLA-B*13 19 382 41.94 60.79 –18.86 0.03
HLA-A*30 26 375 42.14 61.13 –19 5.22E-06
HLA-DRB1*16 23 378 29.53 61.75 –32.22 7.00E-06
HLA-B*50 12 389 25.03 60.98 –35.95 6.33E-05
HLA-DRB1*12 19 382 23.46 61.71 –38.26 9.43E-05

#Samples (P): No of SKCM-patients in which HLA-superallele is present; # Samples (A): No of SKCM-patients in which HLA-superallele is absent; #Mean OS (P): Average OS in which HLA-superallele is present; # Mean OS (A): Average OS in which HLA-superallele is absent; Mean Diff OS: Mean difference in mean OS between patients with a specific HLA typing and patients without it; Risk status Survival Favorable (SF) or Survival Unfavorable (SU) HLA-superallele, SF considered as low-risk and SU taken as high-risk groups.