Table 4B.

Tests on differences between pairs of treatment groups

Protein	Antibody	FDR P vs. U	FDR D vs. U	FDR P vs. D
COL1A1	HPA011795	0.0179	0.0002	0.0047
MDH2	HPA019848	0.0006	0.001	0.4593
ANKRD2	HPA040884	0.0014	0.0014	0.8087

We tested differences between pairs of treatment groups for the three proteins that showed an overall significant difference between groups. The table reports the false discovery rates for the comparison between patients treated with prednisone (P) and those who did not receive corticosteroids (U), between patients treated with deflazacort (D) and those who did not receive corticosteroids (U), and between patients treated with prednisone (P) or with deflazacort (D).