Skip to main content
. 2013 Sep 11;100(2):487–499. doi: 10.1016/j.antiviral.2013.09.002

Table 1.

The primers of the plasmids used in the study (the restriction endonucleases sites were underlined and italic, T7 promoter and tobramycin aptamer tag sequences were underlined in the forward and reverse primers).

Plasmids Primers
pCold-I-DDX5/pGEX-4T-3-DDX5 Forward primer: GATACTAGGATCCATGTCGGGTTATTCGAG
Reverse primer: GAGCTCGGTCGACTTATTGGGAATATCCTG
pcDNA3.1-DDX5
(K144E and S279L)-HA
Forward primer: GTCATGCAAGCTTGCCACCATGTCGGGTTA TTCGAGTGAC
Reverse primer: GTAGTTAGGATCCCTAGGCGTAGTCGGGGA CGTCGTAGGGGTATTGGGAATATCCTGTT
pcDNA3.1-core-MYC Forward primer: GCCGCCAAGCTTGCCACCATGATGACTAAA AAACCAGGAGGGCC
Reverse primer: GCGGGCGGGATCCCTACAAATCTTCTTCAG AAATCAACTTCTGTTCGGCTCCTGCACAA
pcDNA3.1-NS3-MYC Forward primer: GTATTATGGTACCGCCACCATGGGGGGCGT GTTTTGGGAC
Reverse primer: GCGGGCGCTCGAGCTACAAATCTTCTTCAG AAATCAACTT CTGTTCTCTCTTCCCTGCT
pcDNA3.1-NS5
(Mtase) -MYC
Forward primer: GATATATGGTACCGCCACCATGGGAAGGCC TGGGGG
Reverse primer: GCGGGCGCTCGAGCTACAAATCTTCTTCAG AAATCAACTTCTGTTCTCCCACGGCTCTT
pcDNA3.1-NS5
(RdRp) -MYC
Forward primer: GACATATGGTACCGCCACCATGTCAGCC
AGCTCTCTC
reverse primer: GCGGGCGCTCGAGCTACAAATCTTCTTCAG AAATCAACTTCTGTTCGATGACCCTGTCT
DDX5-K144E (Quikchange) Forward primer: GTGGCACAGACTGGATCTGGGGAGACATT GTCTTATTTGCTTCCT
Reverse primer: AGGAAGCAAATAAGACAATGTCTCCCCA
GATCCAGTCTGTGCCAC
DDX5-S279L
(Quikchange)
Forward primer: GATAGGCAAACTCTAATGTGGCTAGCGAC TTGGCCAAAAG AAGTA
Reverse primer: TACTTCTTTTGGCCAAGTCGCTAGCCACA TTAGAGTTTGCCTATC
pET-24a-core Forward primer: GCCGCCGAATTCATGACTAAAAAACCAG
Reverse primer: ATAATACTCGAGGGCTCCTGCACAAGCTAT
pET-24a-NS3 Forward primer: GACGACACATATGGGGGGCGTGTTTTGGGA
Reverse primer: GCGCGCGCTCGAGTCTCTTCCCTGCTGCAA
pET-24a-NS5-MTase Forward primer: GATTTACATATGGGAAGGCCTGGGGGCAG
Reverse primer: GCTCATACTCGAGTCCCACGGCTCTTGTTCC
pET-24a-NS5-RdRP Forward primer: GATATGCGGATCCTCAGCCAGCTCTCTCGT
Reverse primer: GGCCGACTCGAGGATGACCCTGTCTTCCTGG ATCAAGACG
pcDNA3.1-DDX5r, pcDNA3.1-DDX5r- (K144E,S279L)-HA (Quikchange) Forward primer: TAAGACCTGATAGGCAAACCTTGATGTGGTC CGCTACTTGGCCAAAAGAAGTAAGA
Reverse primer: TCTTACTTCTTTTGGCCAAGTAGCGGACCAC ATCAAGGTTTGCCTATCAGGTCTTA
JEV 5′ UTR Forward primer: TAATACGACTCACTATAGGGAGAAGTTTATC TGTGTGAACTTCTTGGCTTA
Reverse primer: GGCTCAGCACGAGTGTAGCTAAACCTCGCTA TACTAAGCCGGTTATCTTCCGTTCTAA
JEV 3′ UTR Forward primer: TAATACGACTCATAGGGTAGTGTGATTTAAG GTAGAAAAGTAG
Reverse primer: GGCTCAGCACGAGTGTAGCTAAACCTCGCTA TACTAAGCCAGATCTTGTGTTCTTCCT
Ampicillin
resistance
gene (1–250 bp)
Forward primer: TAATACGACTCACTATAGGGATGAGTATTCA ACATTTCCGTGTCG
Reverse primer: GGCTCAGCACGAGTGTAGCTAAACCTCGCTA TACTAAGCCCGTCAATACGGGATAATAC
pGEX-4T-3-core Forward primer: GCCGCCGGATCCATGACTAAAAAACCAG
Reverse primer: ATAATACTCGAGGGCTCCTGC ACAAGCTAT
pGEX-4T-3-NS3 Forward primer: GACGACAGAATTCGGGGGCGTGTTTTGGGA
Reverse primer: GCGCGCGCTCGAGTCTCTTCCCTGCTGCAA
pGEX-4T-3-NS5-MTase Forward primer: GATTTAGAATTCGGAAGGCCTGGGGGCAG
Reverse primer: GCTCATACTCGAGTCCCACGGCTCTTGTTCC
pGEX-4T-3-NS5-RdRP Forward primer: GATATGCGGATCCTCAGCCAGCTCTCT CGT
Reverse primer: GGCCGACTCGAGGATGACCCTGTCTTCCTGG ATCAAGACG