Table 3.
Number of laboratory isolates and/or synthetic constructs used in evaluation of multiplex PCR and electronic microarray.
| Target pathogen | Number of isolates tested by multiplex PCR | Number of isolates tested by electronic microarray | Reference to the heat map (Fig. 2) |
|---|---|---|---|
| Viruses associated with bovine respiratory disease complex | |||
| BVDV-1 | 4 | 3 | 1-3 |
| BVDV-2 | 4 | 3 | 4-6 |
| Hobi virus | 1 | 1 | 7 |
| BoHV-1 | 7 | 4 | 8-11 |
| BCoV | 3 | 3 | 12-14 |
| BPI3 | 3 | 2 | 15,16 |
| BRSV | 2 | 1 | 17 |
| Bacteria associated with bovine respiratory disease complex | |||
| M. haemolytica type 1 | 6 | 2 | 18, 19 |
| M. haemolytica type 2 | 6 | 1 | 20 |
| M. haemolytica type 6 | 6 | 3 | 21-23 |
| P. multocida | 6 | 6 | 24-29 |
| H. somni | 1 | 1 | 30 |
| M. bovis | 5 | 3 | 31-33 |
| Viruses associated with bovine enteric diseases | |||
| BVDV-1 | 4 | 3 | 34-36 |
| BVDV-2 | 4 | 3 | 37-39 |
| Atypical pestivirus | 1 | 1 | 40 |
| BRoV -A | 2 | 2 | 41, 42 |
| BRoV-B | 4 | 1 | 43 |
| BRoV-C | 1 | 1 | 44 |
| BToV | 2 | 2 | 45, 46 |
| BCoV | 3 | 3 | 47-49 |
| Bacteria and protozoa associated with bovine enteric diseases | |||
| C. perfringens | 1 | 1 | 50 |
| E. zuernii | 1 | 1 | 51 |
| E. bovis | 1 | 1 | 52 |
| C. parvum | 2 | 1 | 53 |
| S.e. Dublin | 3 | 3 | 54-56 |
| S.e. Typhimurium | 4 | 4 | 57-60 |
| E. coli | 5 | 4 | 61-64 |