Table 2.
Amino acid identity in the structural proteins of group I coronavirus reference strains to strain CB/05
| Coronavirus strain | GenBank accession no. | Amino acid identity (%) to isolate CB/05 |
|||
|---|---|---|---|---|---|
| S | E | M | N | ||
| CCoV II-Insavc1 | D13096 | 92 | 95 | 90 | 92 |
| CCoV II-BGF10 | AY342160 | 92 | 87 | 89 | 92 |
| CCoV I-Elmo/02 | AY307020 (S), AY426983 (E), ND (M, N) | 44 | 85 | 87 | 89 |
| CCoV I-23/03 | AY307021 (S), AY426984 (E) AY548235 (M, N) | 44 | 86 | 86 | 89 |
| FCoV II-79-1146 | NC_007025 | 94 | 78 | 84 | 77 |
| FCoV II-79-1683 | X80799 (S), FCY13921 (E, M, N) | 95 | 97 | 87 | 79 |
| FCoV I-KU-2 | D32044 (S), AAB47501 (M) AB086881 (N) | 43 | NA | 82 | 76 |
| FCoV I-Black | AB088223 (S), AB086903 (M, N), | 42 | NA | 82 | 77 |
| FCoV I-UCD1 | AB088222 (S), AB086902 (M, N) | 43 | NA | 84 | 77 |
| TGEV-Purdue | NC_002306 | 80 | 96 | 94 | 95 |
ND, sequence not deposited. NA, sequence not available.