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. 2015 Jul 26;210:100–105. doi: 10.1016/j.virusres.2015.07.018

Table 1.

Coding potential, putative transcription regulatory sequences and encoded proteins of the CCoV-I 23/03 genome.

Putative gene
Putative TRS
Putative protein
Gene name Coding sequence (nt) Start nt position TRS sequencea Protein name Protein size (aa)
ORF1ab 314–12,327
12,327–20,358
90 UCGAACUAAACGAAAU Pp1ab 6681
ORF1a 314–12,358 Pp1a 4014
ORF2 20,359–24,804 20,319 AUUACUAAACUUUGG S 1481
ORF3 24,812–25,435 24,797 UUCAUUAAACUCAAA 3 207
ORF3a 25,447–25,683 25,434 AGAACUAAACAAAUG 3a 78
ORF3b 25,628–25,843 3b 71
ORF3c 25,840–26,595 3c 251
ORF4 26,561–26,809 26,514 GGUUCUAAACGAAAU E 82
ORF5 26,820–27,614 26,807 UGAACUAAACAAAAU M 264
ORF6 27,627–28,769 27,611 AUAACUAAACUUCUA N 380
ORF7a 28,774–29,079 28,762 CGAACUAAACGAAUG 7a 101
ORF7b 29,084–29,725 7b 213

a The conserved TRS core is underlined.