Table 2.
PDCoV strains described in this study.
| No. | Strain | Accession No. | Collection date | Collection Country | Length (bp) |
|---|---|---|---|---|---|
| 1 | HKU15-44 | JQ065042 | 2009 | China: Hong Kong | 25430 |
| 2 | USA/Iowa136/2015 | KX022602 | 2015 | USA: Iowa | 25382 |
| 3 | USA/Nebraska145/2015 | KX022605 | 2015 | USA: Nebraska | 25320 |
| 4 | USA/Michigan448/2014 | KR265850 | 2014 | USA: Michigan | 25394 |
| 5 | USA/Indiana453/2014 | KR265851 | 2014 | USA: Indiana | 25394 |
| 6 | USA/Nebraska210/2014 | KR265861 | 2014 | USA: Nebraska | 25404 |
| 7 | OhioCVM1/2014 | KJ769231.1 | 2014 | USA | 25433 |
| 8 | IL/2014/026PDV_P11 | KP981395.1 | 2014 | USA: Illinois | 25422 |
| 9 | USA/Minnesota292/2014 | KR265864 | 2014 | USA: Minnesota | 25395 |
| 10 | YMG/JPN/2014 | LC260044 | 2014 | Japan: Yamagata | 25362 |
| 11 | KNU14-04 | KM820765 | 2012 | South Korea | 25422 |
| 12 | P1_16_BTL_0115/PDCoV/2016/Lao | KX118627 | 2016 | Laos | 25405 |
| 13 | Vietnam/Binh21/2015 | KX834352 | 2015 | Viet Nam | 25406 |
| 14 | Thailand/S5015L/2015 | KU051649 | 2015 | Thailand | 25405 |
| 15 | CH/SXD1/2015 | KT021234 | 2015 | China: Shangxi | 25419 |
| 16 | CHN-JS-2014 | KP757892 | 2014 | China: Jangsu | 25420 |
| 17 | CH/Sichuan/S27/2012 | KT266822 | 2012 | China: Sichuan | 25404 |
| 18 | CHN-AH-2004 | KP757890 | 2004 | China: Anhui | 25420 |
| 19 | CHN-HB-2014 | KP757891 | 2014 | China: Heibei | 25420 |
| 20 | CHN/Tianjin/2016 | KY065120 | 2016 | China: Tianjin | 25413 |
| 21 | CH/JXJGS01/2016 | KY293677 | 2016 | China: Jiangxi | 25438 |
| 22 | CH/Hunan/2014 | KY513724 | 2014 | China: Hunan | 25413 |
| 23 | CH/Jiangsu/2014 | KY513725 | 2014 | China: Jiangsu | 25422 |
| 24 | CHN-HG-2017 | MF095123 | 2017 | China | 25399 |
| 25 | GD | MF431742 | 2015 | China: Guangdong | 25420 |
| 26 | SD | MF431743 | 2014 | China: Shandong | 25414 |
| 27 | CHN/GS/2017/1 | MF642324 | 2017 | China: Gansu | 25420 |
| 28 | CHN-HN-1601 | MG832584 | 2016 | China | 25419 |
| 29 | HNZK-02 | MH708123 | 2018 | China: Henan | 25453 |