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. 2009 Nov 24;28(5):1253–1263. doi: 10.1016/j.vaccine.2009.11.016

Table 1.

Oligonucleotides used for cloning of the astrovirus sequences.

Name Sequence Locationa Orientation Genbank no.b Virus
FMDVFP1 GGGTTTTACAAACCTGTGAT G 7786-7806 Sense DQ248888 FMDV
FMDVRP1 CCGCACACGGCGTTCACCC 7982-7920 Antisense DQ248888 FMDV
FMDVFP2 TAAGGACTTTGTGGTCTATG
FMDVFP2Rev CATAGACCACAAAGTCCTTA



FMDVRP2 GGCCTCGATGCTTGGGAGCC Sense
FMDVRP2Rev GGCTCCCA AGCATCGAGG CC Antisense



DucPicoFP1 AGATTGATTGAAGCCTCCAGTTTG 6505-6528 Sense AY278552 Human poliovirus 2
7113-7136 Sense AY563023 Duck picornavirus



DucPicoRP1 ATGSWDGTNCCHGARCABCC YGADGGCAT 6841-6869 Antisense AY278552 Human poliovirus 2
7458-7486 Antisense AY563023 Duck picornavirus



DucPicoFP2 GGAAAGGAAGATGAGGGCATTG Sense
DucPicoFP2rev CAATGCCCTCATCTTCCTTTCC Antisense
DucPIcoRP2 GCCAGTTTGGAGAGTATTTAC Antisense
DucPicoRP2Rev GTAAATACTCTCCAAACTGGC Sense



CapFP EcoR I Sense
ccGAATTCATGGCCGATAAGGCTGGGCCGC



polyT-GC GCGCGCGCTTTTTTTTTTTTTTTTTT Antisense



CapRP Not I Antisense
ggGCGGCCGCTAGTGATGGTGATGGTGATGCTCGGCGTGGCCGCGGCTGCTAGCAGG
a

Location of the oligonucleotides in agreement with the sequences of the food and mouth disease virus (FMDV), duck picornavirus, and human poliovirus 2, respectively.

b

NCBI Genbank.