Table 1.
Plasmids used for generation of the donor plasmids p-IBV-Δ3ab, -Δ5ab and -Δ3ab5ab.
| Plasmid | Genes | Coordinates | Length (nt) | 3′-end RES | Surrounding RES | Inserted in plasmid |
|---|---|---|---|---|---|---|
| p-IBV-5 | 5′-UTR | 1…497 | 497 | BstBI | n.a. | n.a. |
| p-IBV-1b | 1b, S | 19,610…20,379 | 770 | XhoI | BstBI | p-IBV-5 |
| p-IBV-S | S | 20,379…23,590 | 3211 | StyI | XhoI | p-IBV-5-1b |
| p-IBV-SIR | S, 3ab, E, M | 23,591…25,318 | 1728 | EcoRI | StyI | p-IBV-5-1b-S |
| p-IBV-3 T | 5ab, N, 3′-UTR | 25,319…27,730 | 2422 | MssI, PacI | EcoRI | p-IBV-5-1b-S-SIR |
| p-Δ3ab | n.a. | 23,604…24,304 | 349 | n.a. | NheI, PmlI | p-IBV-5-1b-S-SIR |
| p-Δ5ab | n.a. | 25,467…25,974 | 115 | n.a. | AfeI, NheI | p-IBV-3 T |