Table 1.
Amino acid sequence of overlapping 15-mer peptides of the N protein of the SARS CoV
| Peptide number | 15-mer Amino acid sequence | Pool | Start position |
|---|---|---|---|
| 1 | MSDNGPQSNQRSAPR | 1 | 1 |
| 2 | PQSNQRSAPRITFGG | 1 | 6 |
| 3 | RSAPRITFGGPTDST | 1 | 11 |
| 4 | ITFGGPTDSTDNNQN | 1 | 16 |
| 5 | PTDSTDNNQNGGRNG | 1 | 21 |
| 6 | DNNQNGGRNGARPKQ | 1 | 26 |
| 7 | GGRNGARPKQRRPQG | 1 | 31 |
| 8 | ARPKQRRPQGLPNNT | 1 | 36 |
| 9 | RRPQGLPNNTASWFT | 1 | 41 |
| 10 | LPNNTASWFTALTQH | 1 | 46 |
| 11 | ASWFTALTQHGKEEL | 2 | 51 |
| 12 | ALTQHGKEELRFPRG | 2 | 56 |
| 13 | GKEELRFPRGQGVPI | 2 | 61 |
| 14 | RFPRGQGVPINTNSG | 2 | 66 |
| 15 | QGVPINTNSGPDDQI | 2 | 71 |
| 16 | NTNSGPDDQIGYYRR | 2 | 76 |
| 17 | PDDQIGYYRRATRRV | 2 | 81 |
| 18 | GYYRRATRRVRGGDG | 2 | 86 |
| 19 | ATRRVRGGDGKMKEL | 2 | 91 |
| 20 | RGGDGKMKELSPRWY | 2 | 96 |
| 21 | KMKELSPRWYFYYLG | 3 | 101 |
| 22 | SPRWYFYYLGTGPEA | 3 | 106 |
| 23 | FYYLGTGPEASLPYG | 3 | 111 |
| 24 | TGPEASLPYGANKEG | 3 | 116 |
| 25 | SLPYGANKEGIVWVA | 3 | 121 |
| 26 | ANKEGIVWVATEGAL | 3 | 126 |
| 27 | IVWVATEGALNTPKD | 3 | 131 |
| 28 | TEGALNTPKDHIGTR | 3 | 136 |
| 29 | NTPKDHIGTRNPNNN | 3 | 141 |
| 30 | HIGTRNPNNNAATVL | 3 | 146 |
| 31 | NPNNNAATVLQLPQG | 4 | 151 |
| 32 | AATVLQLPQGTTLPK | 4 | 156 |
| 33 | QLPQGTTLPKGFYAE | 4 | 161 |
| 34 | TTLPKGFYAEGSRGG | 4 | 166 |
| 35 | GFYAEGSRGGSQASS | 4 | 171 |
| 36 | GSRGGSQASSRSSSR | 4 | 176 |
| 37 | SQASSRSSSRSRGNS | 4 | 181 |
| 38 | RSSSRSRGNSRNSTP | 4 | 186 |
| 39 | SRGNSRNSTPGSSRG | 4 | 191 |
| 40 | RNSTPGSSRGNSPAR | 4 | 196 |
| 41 | GSSRGNSPARMASGG | 5 | 201 |
| 42 | NSPARMASGGGETAL | 5 | 206 |
| 43 | MASGGGETALALLLL | 5 | 211 |
| 44 | GETALALLLLDRLNQ | 5 | 216 |
| 45 | ALLLLDRLNQLESKV | 5 | 221 |
| 46 | DRLNQLESKVSGKGQ | 5 | 226 |
| 47 | LESKVSGKGQQQQGQ | 5 | 231 |
| 48 | SGKGQQQQGQTVTKK | 5 | 236 |
| 49 | QQQGQTVTKKSAAEA | 5 | 241 |
| 50 | TVTKKSAAEASKKPR | 5 | 246 |
| 51 | SAAEASKKPRQKRTA | 6 | 251 |
| 52 | SKKPRQKRTATKQYN | 6 | 256 |
| 53 | QKRTATKQYNVTQAF | 6 | 261 |
| 54 | TKQYNVTQAFGRRGP | 6 | 266 |
| 55 | VTQAFGRRGPEQTQG | 6 | 271 |
| 56 | GRRGPEQTQGNFGDQ | 6 | 276 |
| 57 | EQTQGNFGDQDLIRQ | 6 | 281 |
| 58 | NFGDQDLIRQGTDYK | 6 | 286 |
| 59 | DLIRQGTDYKHWPQI | 6 | 291 |
| 60 | GTDYKHWPQIAQFAP | 6 | 296 |
| 61 | HWPQIAQFAPSASAF | 7 | 301 |
| 62 | AQFAPSASAFFGMSR | 7 | 306 |
| 63 | SASAFFGMSRIGMEV | 7 | 311 |
| 64 | FGMSRIGMEVTPSGT | 7 | 316 |
| 65 | IGMEVTPSGTWLTYH | 7 | 321 |
| 66 | TPSGTWLTYHGAIKL | 7 | 326 |
| 67 | WLTYHGAIKLDDKDP | 7 | 331 |
| 68 | GAIKLDDKDPQFKDN | 7 | 336 |
| 69 | DDKDPQFKDNVILLN | 7 | 341 |
| 70 | QFKDNVILLNKHIDA | 7 | 346 |
| 71 | VILLNKHIDAYKTFP | 8 | 351 |
| 72 | KHIDAYKTFPPTEPK | 8 | 356 |
| 73 | YKTFPPTEPKKDKKK | 8 | 361 |
| 74 | PTEPKKDKKKKTDEA | 8 | 366 |
| 75 | KDKKKKTDEAQPLPQ | 8 | 371 |
| 76 | KTDEAQPLPQRQKKQ | 8 | 376 |
| 77 | QPLPQRQKKQPTVTL | 8 | 381 |
| 78 | RQKKQPTVTLLPAAD | 8 | 386 |
| 79 | PTVTLLPAADMDDFS | 8 | 391 |
| 80 | LPAADMDDFSRQLQN | 8 | 396 |