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. 2008 Feb 21;92(3):207–214. doi: 10.1016/j.biosystems.2008.01.006

Table 2.

Identified genes (length > 300 bps) in these 11 HBoV genomes under study

SN Gene GC3Sa GCb ENC F1c F2d SN Gene GC3S GC ENC F1 F2
1 WLL-3-NS1 0.31 0.42 46.63 −0.03 −0.41 23 CU6-VP1 0.30 0.42 42.07 0.26 0.11
2 WLL-3-NP1 0.40 0.44 47.96 −0.50 0.16 24 CU6-VP2 0.31 0.43 41.09 0.29 0.14
3 WLL-3-VP1 0.30 0.42 42.12 0.24 0.10 25 BJ3064-NS1 0.31 0.42 46.63 −0.03 −0.41
4 WLL-3-VP2 0.31 0.43 41.27 0.27 0.13 26 BJ3064-NP1 0.40 0.44 47.41 −0.54 0.18
5 WLL-2-NS1 0.31 0.42 46.69 −0.03 −0.41 27 BJ3064-VP1 0.29 0.42 41.97 0.25 0.11
6 WLL-2-NP1 0.40 0.44 47.96 −0.50 0.16 28 BJ3064-VP2 0.31 0.43 41.10 0.29 0.14
7 WLL-2-VP1 0.30 0.42 42.14 0.24 0.10 29 WLL-1-NS1 0.31 0.42 46.84 −0.03 −0.41
8 WLL-2-VP2 0.31 0.43 41.31 0.27 0.12 30 WLL-1-NP1 0.39 0.44 47.91 −0.49 0.16
9 BJ3722-NS1 0.30 0.41 46.57 −0.03 −0.41 31 WLL-1-VP1 0.29 0.42 41.89 0.25 0.12
10 BJ3722-NP1 0.39 0.44 47.91 −0.49 0.16 32 WLL-1-VP2 0.31 0.43 40.87 0.28 0.15
11 BJ3722-VP1 0.29 0.42 41.97 0.25 0.11 33 CRD2-NS1 0.30 0.41 46.41 −0.02 −0.41
12 BJ3722-VP2 0.31 0.43 41.10 0.29 0.14 34 CRD2-NP1 0.39 0.44 47.91 −0.49 0.16
13 CU74-NS1 0.30 0.41 46.57 −0.03 −0.40 35 CRD2-VP1 0.30 0.42 41.95 0.25 0.12
14 CU74-NP1 0.39 0.43 47.76 −0.49 0.16 36 CRD2-VP2 0.31 0.43 41.00 0.29 0.14
15 CU74-VP1 0.30 0.42 42.27 0.25 0.12 37 st2-NS1 0.31 0.42 46.63 −0.03 −0.41
16 CU74-VP2 0.31 0.43 41.41 0.28 0.14 38 st2-NP1 0.39 0.43 47.76 −0.49 0.16
17 CU49-NS1 0.30 0.41 46.40 −0.03 −0.41 39 st2-VP1 0.30 0.42 41.87 0.25 0.11
18 CU49-NP1 0.39 0.44 47.91 −0.49 0.16 40 st2-VP2 0.31 0.43 40.93 0.29 0.14
19 CU49-VP1 0.30 0.42 42.67 0.23 0.11 41 st1-NS1 0.30 0.41 46.40 −0.03 −0.42
20 CU49-VP2 0.31 0.43 41.95 0.27 0.14 42 st1-NP1 0.40 0.44 48.42 −0.50 0.16
21 CU6-NS1 0.30 0.41 46.46 −0.03 −0.41 43 st1-VP1 0.29 0.42 42.16 0.23 0.12
22 CU6-NP1 0.40 0.44 48.04 −0.49 0.16 44 st1-VP2 0.31 0.43 41.37 0.26 0.14

SN: sequence number; ENC: effective number of codons.

a

The frequency of G + C at the third synonymously variable coding position.

b

The frequency of G + C of this gene.

c

The first axis values of each gene in COA.

d

The second axis values of each gene in COA.