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. 2010 Apr 21;145(3):245–251. doi: 10.1016/j.vetmic.2010.04.010

Fig. 2.

Fig. 2

Phylogenetic analysis of bubaline coronavirus (BuCoV). Neighbor-joining tree based on partial 5′ end of the spike-protein gene of bovine and bubaline CoVs. For phylogenetic tree construction, the following reference strains were used (GenBank accession numbers are reported in parentheses): BuCoV strain 179/07-11 (EU019216); BCoV strains Mebus (U00735), Quebec (AF220295), DB2 (DQ811784), ENT (AF391541), LUN (AF391542), Alpaca (DQ915164), KWD1 (AY935637), KWD2 (AY935638), KWD7 (AY935643), KWD8 (AY935644), KWD9 (AY935645), KWD10 (AY935646), KCD8 (DQ389639), KCD9 (DQ389640), KCD10 (DQ389641), L9 (M64667), OK-0514-3 (AF058944), LSU-94LSS-051-2 (AF058943), LY-138 (AF058942), 339/06 (EF445634). The tree is rooted on the group-2 human coronavirus HCoV-OC43 (NC_005147). A statistical support was provided by bootstrapping over 1000 replicates. The scale bars indicate the estimated numbers of nucleotide substitutions per site.