Table 1.
GenBank accession numbers of Betacoronavirus 1 reference strains used in the phylogenetic analysis.
| Strain | Year | Host | Clinical forms | Country | GenBank accession no. |
|
|---|---|---|---|---|---|---|
| S | HE | |||||
| Wisent/2010 | 2010 | Wisent | Winter dysentery | Korea | HM573326 | HM573321 |
| Sitatunga/2010 | 2010 | Sitatunga | Winter dysentery | Korea | HM573329 | HM573324 |
| Nyala/2010 | 2010 | Nyala | Winter dysentery | Korea | HM573330 | HM573325 |
| Himalayan Tahr 1/2010 | 2010 | Himalayan tahr | Winter dysentery | Korea | HM573327 | HM573322 |
| Himalayan Tahr 2/2010 | 2010 | Himalayan tahr | Winter dysentery | Korea | HM573328 | HM573323 |
| 0501/2005 | 2005 | Cattle | – | Korea | EU686689 | EU401975 |
| 0502/2005 | 2005 | Cattle | – | Korea | EU401986 | EU401676 |
| BC94/1994 | 1994 | Cattle | – | Korea | DQ389641 | EU401979 |
| SUN5/1994 | 1994 | Cattle | – | Korea | DQ389657 | EU401978 |
| A3/1994 | 1994 | Cattle | – | Korea | AY935640 | EU401977 |
| KCD1/2004 | 2004 | Calf | Calf diarrhea | Korea | DQ389632 | DQ389642 |
| KCD2/2004 | 2004 | Calf | Calf diarrhea | Korea | DQ389633 | DQ389643 |
| KCD3/2004 | 2004 | Calf | Calf diarrhea | Korea | DQ389634 | DQ389644 |
| KCD4/2004 | 2004 | Calf | Calf diarrhea | Korea | DQ389635 | DQ389645 |
| KCD5/2004 | 2004 | Calf | Calf diarrhea | Korea | DQ389636 | DQ389646 |
| KCD6/2004 | 2004 | Calf | Calf diarrhea | Korea | DQ389637 | DQ389647 |
| KCD7/2004 | 2004 | Calf | Calf diarrhea | Korea | DQ389638 | DQ389648 |
| KCD8/2004 | 2004 | Calf | Calf diarrhea | Korea | DQ389639 | DQ389649 |
| KCD9/2004 | 2004 | Calf | Calf diarrhea | Korea | DQ389640 | DQ389650 |
| KCD10/2004 | 2004 | Calf | Calf diarrhea | Korea | DQ389641 | DQ389651 |
| KWD1/2002 | 2002 | Cattle | Winter dysentery | Korea | AY935637 | DQ016118 |
| KWD2/2002 | 2002 | Cattle | Winter dysentery | Korea | AY935638 | DQ016119 |
| KWD3/2002 | 2002 | Cattle | Winter dysentery | Korea | AY935639 | DQ016120 |
| KWD4/2002 | 2002 | Cattle | Winter dysentery | Korea | AY935640 | DQ016121 |
| KWD5/2002 | 2002 | Cattle | Winter dysentery | Korea | AY935641 | DQ016122 |
| KWD6/2002 | 2002 | Cattle | Winter dysentery | Korea | AY935642 | DQ016123 |
| KWD7/2002 | 2002 | Cattle | Winter dysentery | Korea | AY935643 | DQ016124 |
| KWD8/2002 | 2002 | Cattle | Winter dysentery | Korea | AY935644 | DQ016125 |
| KWD9/2002 | 2002 | Cattle | Winter dysentery | Korea | AY935645 | DQ016126 |
| KWD10/2002 | 2002 | Cattle | Winter dysentery | Korea | AY935646 | DQ016127 |
| KWD11/2002 | 2002 | Cattle | Winter dysentery | Korea | DQ389652 | DQ994162 |
| KWD12/2002 | 2002 | Cattle | Winter dysentery | Korea | DQ389653 | DQ994163 |
| KWD13/2002 | 2002 | Cattle | Winter dysentery | Korea | DQ994164 | DQ389654 |
| KWD14/2002 | 2002 | Cattle | Winter dysentery | Korea | DQ994165 | DQ389655 |
| KWD15/2002 | 2002 | Cattle | Winter dysentery | Korea | DQ994166 | DQ389656 |
| KWD16/2002 | 2002 | Cattle | Winter dysentery | Korea | DQ994167 | DQ389657 |
| KWD17/2002 | 2002 | Cattle | Winter dysentery | Korea | DQ994168 | DQ389658 |
| KWD18/2002 | 2002 | Cattle | Winter dysentery | Korea | DQ994169 | DQ389659 |
| KWD19/2002 | 2002 | Cattle | Winter dysentery | Korea | DQ994170 | DQ389660 |
| White-tailed deer/1994 | 1994 | White-tailed deer | Sporadic diarrhea | USA | FJ425187 | FJ425187 |
| Calf-giraffe/2003 | 2003 | Giraffe | Winter dysentery | USA | EF424623 | EF424623 |
| Alpaca/1998 | 1998 | Alpaca | Severe diarrhea | USA | DQ915164 | DQ915164 |
| LUN/1998 | 1998 | Cattle | Bovine shipping fever | USA | AF391542 | AF391542 |
| ENT/1998 | 1998 | Cattle | Bovine shipping fever | USA | AF391541 | AF391541 |
| Sable antelope/2003 | 2003 | Sable antelope | Diarrhea | USA | EF424621 | EF424621 |
| Sambar deer/1994 | 1994 | Sambar deer | Winter dysentery | USA | FJ425188 | FJ425188 |
| Waterbuck/1994 | 1994 | Waterbuck | Winter dysentery | USA | FJ425186 | FJ425186 |
| LSU/1994 | 1994 | Cattle | Respiratory problem | USA | AF058943 | AF058943 |
| OK/1996 | 1996 | Cattle | Respiratory problem | USA | AF058944 | AF058944 |
| E-DB2/1984 | 1984 | Cattle | – | USA | DQ811784 | DQ811784 |
| LY-381 | 1965 | Cattle | – | USA | AF058942 | AF058942 |
| Nordern vaccine/1991 | 1991 | Cattle | – | USA | M64668 | – |
| L9/1991 | 1991 | Cattle | – | USA | M64667 | M76327 |
| Mebus/1972 | 1972 | Cattle | – | USA | U00735 | U00735 |
| Quebec/1972 | 1972 | Cattle | – | Canada | AF220295 | – |
| Bubalus/2007 | 2007 | Water buffalo | Severe diarrhea | Italy | EU019216 | EU019216 |