Table 1.
Oligos | Size (nt) | TTm (°C) | G+C% | Priming site | Prod. size (nt) | Sequence 5′→3′ |
FCoV | ||||||
No.66 (F) | 18 | 50 | 39 | 2720→2737 | CTG CAT GTC AAA CTA TTG | |
No.67 (R) | 17 | 52 | 53 | 3521←3504 | CTT GTG CAT CAG CAC TC | |
No.30 (R) | 16 | 48 | 50 | 2923←2981 | TGC TAT TAT GGG ACG G | |
No.66 (F) + No.67 (R) | 800 | |||||
No.66 (F) + No.30 (R) | 217 | |||||
Probe | ||||||
FCoV-S | 18 | 66 | 50 | 2816→2834 | ATT GGC ATC TGT TGA GGC |
nt = nucleotides.
TTm = theoretical annealing temperature based on 100% identity.
F = forward primer; R = reverse primer.