Table 3.
Nucleotide and amino acid sequence identity (%) between the nonstructural and structural proteins of CRCoV-K37 and other CRCoV strains and bovine coronavirus (ENT strain).
Strain | Country | Sequence acid identity (%) to CRCoV-K37 |
|||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
32 kDa | HE | S | 4.9 kDa | 2.7 kDa | 12.8 kDa | E | M | N | I | ||
K39 | Korea | 99.2b | 99.1 | 99.7 | 100 | 100 | 99.4 | 100 | 99.0 | 99.4 | 99.4 |
98.6c | 99.1 | 99.3 | 100 | 100 | 98.2 | 100 | 99.1 | 99.8 | 98.1 | ||
K9 | Korea | 98.8 | 99.1 | 99.5 | 100 | 100 | 99.7 | 100 | 99.1 | 99.4 | 99.4 |
97.8 | 98.6 | 99.0 | 100 | 100 | 99.1 | 100 | 99.1 | 99.3 | 98.1 | ||
240-05 | Italy | 98.3 | 97.8 | 98.9 | 97.8 | 96.2 | 98.5 | 99.6 | 97.4 | 97.9 | 97.8 |
96.8 | 97.2 | 98.6 | 95.5 | 92.0 | 96.3 | 100 | 97.4 | 98.7 | 93.7 | ||
4182 | UK | 97.8 | 97.8 | 98.9 | NPd | NP | 98.2 | 100 | 97.7 | 97.9 | 97.3 |
96.4 | 96.7 | 98.0 | NP | NP | 97.2 | 100 | 97.4 | 98.4 | 93.2 | ||
ENTa | 97.6 | 98.1 | 96.4 | NP | NP | 98.2 | 99.6 | 98.8 | 97.8 | 97.8 | |
97.1 | 98.1 | 95.3 | NP | NP | 98.2 | 98.8 | 98.3 | 98.0 | 94.7 |
Bovine coronavirus ENT strain.
Nucleotide sequences homology is in non-bold.
Amino acid sequences homology is in bold.
NP, not present.