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. 2010 Feb 1;144(3):274–286. doi: 10.1016/j.vetmic.2010.01.019

Table 2.

Genbank accession numbers of Korea strains and the reference group A rotavirus strains used in phylogenetic analysis.

Genes Strains Type Species Accession number Genes Strains Type Species Accession number
VP4 BRV033 P[1] Bovine U62155 VP4 19 P[7] Porcine FJ870331
NCDV P[1] Bovine M63267 24 P[7] Porcine FJ870332
C486 P[1] Bovine Y00127 25-1 P[7] Porcine FJ870333
RF P[1] Bovine U65924 25-2 P[7] Porcine FJ870334
11-1 P[1] Porcine FJ807880 42-1 P[7] Porcine FJ870335
66-1 P[1] Porcine FJ870285 47-1 P[7] Porcine FJ870336
SA11 P[2] Simian M23188 47-2 P[7] Porcine FJ870337
RRV P[3] Simian M18736 49 P[7] Porcine FJ870338
RV5 P[4] Human M32559 52 P[7] Porcine FJ870339
CJN-M P[5] Bovine D16351 53 P[7] Porcine FJ870340
Gotffried P[6] Porcine M33516 57 P[7] Porcine FJ870341
OSU P[7] Porcine X13190 57-1 P[7] Porcine FJ870342
JL94 P[7] Porcine AY523636 61-1 P[7] Porcine FJ870343
SW20/21 P[7] Porcine AF427125 63-1 P[7] Porcine FJ870344
PP-1 P[7] Bovine AF427520 71 P[7] Porcine FJ870345
06-6-1 P[7] Porcine FJ870288 71-1 P[7] Porcine FJ870346
06-10-1 P[7] Porcine FJ870289 74-1 P[7] Porcine FJ870347
06-12-1 P[7] Porcine FJ870290 75-1 P[7] Porcine FJ870348
06-14-1 P[7] Porcine FJ870291 78-1 P[7] Porcine FJ870349
06-22-1 P[7] Porcine FJ870292 80-1 P[7] Porcine FJ870350
06-42-2 P[7] Porcine FJ870293 82-1 P[7] Porcine FJ870351
06-44-2 P[7] Porcine FJ870294 85 P[7] Porcine FJ870352
06-46-2 P[7] Porcine FJ870295 85-1 P[7] Porcine FJ870353
06-54-1 P[7] Porcine FJ870296 90-1 P[7] Porcine FJ870354
06-61-3 P[7] Porcine FJ870297 95-1 P[7] Porcine FJ870355
06-121 P[7] Porcine FJ870298 97-1 P[7] Porcine FJ870356
06-176-10 P[7] Porcine FJ870299 100-1 P[7] Porcine FJ870357
06-235 P[7] Porcine FJ870300 104-1 P[7] Porcine FJ870358
06-258-1 P[7] Porcine FJ870301 115-1 P[7] Porcine FJ870359
06-261-4 P[7] Porcine FJ870302 122-1 P[7] Porcine FJ870360
07-2 P[7] Porcine FJ870303 131 P[7] Porcine FJ870361
07-08-1 P[7] Porcine FJ870304 140-1 P[7] Porcine FJ870362
07-10-1 P[7] Porcine FJ870305 141-1 P[7] Porcine FJ870363
07-12-3 P[7] Porcine FJ870306 150-1 P[7] Porcine FJ870364
07-13-2 P[7] Porcine FJ870307 156-1 P[7] Porcine FJ870365
07-14-1 P[7] Porcine FJ870308 157-1 P[7] Porcine FJ870366
07-15-1 P[7] Porcine FJ870309 174-1 P[7] Porcine FJ870367
07-16-1 P[7] Porcine FJ870310 187-1 P[7] Porcine FJ870368
07-17-1 P[7] Porcine FJ870311 205-1 P[7] Porcine FJ870369
07-17-2 P[7] Porcine FJ870312 208-1 P[7] Porcine FJ870370
07-25 P[7] Porcine FJ870313 210-1 P[7] Porcine FJ870371
07-26-1 P[7] Porcine FJ870314 A-1 P[7] Porcine FJ870372
07-28-7 P[7] Porcine FJ870315 B-1 P[7] Porcine FJ870373
07-33-2 P[7] Porcine FJ870316 C-1 P[7] Porcine FJ870374
07-61-3 P[7] Porcine FJ870317 D-1 P[7] Porcine FJ870375
07-74-1 P[7] Porcine FJ870318 E-1 P[7] Porcine FJ870376
07-95-1 P[7] Porcine FJ870319 H-1 P[7] Porcine FJ870377
07-109-8 P[7] Porcine FJ870320 I-1 P[7] Porcine FJ870378
07-117-2 P[7] Porcine FJ870321 Wa P[8] Human L34161
07-134-7 P[7] Porcine FJ870322 K8 P[9] Human D90260
07-214-1 P[7] Porcine FJ870323 69M P10] Human M60600
1 P[7] Porcine FJ870324 KK3 P11] Bovine D13393
2 P[7] Porcine FJ870325 FI23 P[12] Equine D16342
3 P[7] Porcine FJ870326 MDR13 P[13] Porcine L07886
4 P[7] Porcine FJ870327 Sun9 P[14] Bovine AB158430
8-1 P[7] Porcine FJ870328 LP14 P[15] Ovine L11599
8-2 P[7] Porcine FJ870329 Eb P[16] Murine L18992
16 P[7] Porcine FJ870330 PO-13 P[17] Pigion AB009632
VP4 L338 P[18] Equine D13399 VP7 74-1 G[5] Porcine FJ807831
MC345 P[19] Human D38054 75-1 G[5] Porcine FJ807832
EHP P[20] Murine U08424 78-1 G[5] Porcine FJ807833
Hg18 P[21] Bovine AF237665 80-1 G[5] Porcine FJ807834
160/01 P[22] Lapine AF526374 82-1 G[5] Porcine FJ807835
A34 P[23] Porcine AY174094 85 G[5] Porcine FJ807836
JP32-4 P[23] Porcine AB176689 85-1 G[5] Porcine FJ807837
Hokkaido-14 P[23] Porcine AB176684 95-1 G[5] Porcine FJ807838
06-52-1 P[23] Porcine FJ870286 97-1 G[5] Porcine FJ807839
06-285 P[23] Porcine FJ870287 100-1 G[5] Porcine FJ807840
TUCH P[24] Simian AY596189 104-1 G[5] Porcine FJ807841
Dhaka6 P[25] Human AY773004 110-1 G[5] Porcine FJ807842
134/04-15 P[26] Porcine DQ061053 115-1 G[5] Porcine FJ807843
CMP034 P[27] Porcine DQ534016 122-1 G[5] Porcine FJ807844
ECU534 P[28] Bovine EU805773 131 G[5] Porcine FJ807845
Azuk-1 P[29] Bovine AB454420 140-1 G[5] Porcine FJ807846
Ch-02V0002G3 P[30] Chicken EU486965 150-1 G[5] Porcine FJ807847
Ch-06V0661 P[31] Chicken EU486962 187-1 G[5] Porcine FJ807848
VP7 Wa G[1] Human M21843 205-1 G[5] Porcine FJ807849
S2 G[2] Human M11164 210-1 G[5] Porcine FJ807850
RRV G[3] Simian Z32535 B-1 G[5] Porcine FJ807851
Gotffried G[4] Porcine X06386 E-1 G[5] Porcine FJ807852
OSU G[5] Porcine X04613 I-1 G[5] Porcine FJ807853
JL94 G[5] Porcine AY538665 NCDV G[6] Bovine M12394
KJ44 G[5] Bovine DQ494393 Erv99 G[6] Equine DQ981478
06-6-1 G[5] Porcine FJ807788 Ch2 G[7] Avian X56784
06-10-1 G[5] Porcine FJ807789 BRV16 G[8] Bovine AB077058
06-12-1 G[5] Porcine FJ807790 Sun9 G[8] Bovine AB158431
06-61-3 G[5] Porcine FJ807791 KAG80 G[8] Bovine AB077055
06-258-1 G[5] Porcine FJ807792 NGRBg8 G[8] Bovine AF361439
07-08-1 G[5] Porcine FJ807793 06-46-2 G[8] Porcine FJ807854
07-10-1 G[5] Porcine FJ807794 06-54-1 G[8] Porcine FJ807879
07-12-3 G[5] Porcine FJ807795 06-176-10 G[8] Porcine FJ807855
07-14-1 G[5] Porcine FJ807796 06-261-4 G[8] Porcine FJ807856
07-15-1 G[5] Porcine FJ807797 07-28-7 G[8] Porcine FJ807857
07-16-1 G[5] Porcine FJ807798 07-109-8 G[8] Porcine FJ807858
07-17-1 G[5] Porcine FJ807799 07-134-7 G[8] Porcine FJ807859
07-17-2 G[5] Porcine FJ807800 11-1 G[8] Porcine FJ807860
07-20-1 G[5] Porcine FJ807801 42-1 G[8] Porcine FJ807861
07-25 G[5] Porcine FJ807802 141-1 G[8] Porcine FJ807862
07-26-1 G[5] Porcine FJ807803 156-1 G[8] Porcine FJ807863
07-33-2 G[5] Porcine FJ807804 157-1 G[8] Porcine FJ807864
07-61-3 G[5] Porcine FJ807805 174-1 G[8] Porcine FJ807865
07-74-1 G[5] Porcine FJ807806 208-1 G[8] Porcine FJ807866
07-95-1 G[5] Porcine FJ807807 A-1 G[8] Porcine FJ807867
07-95-3 G[5] Porcine FJ807808 C-1 G[8] Porcine FJ807868
07-117-2 G[5] Porcine FJ807809 D-1 G[8] Porcine FJ807869
07-214-1 G[5] Porcine FJ807810 W161 G[9] Human EF672623
3 G[5] Porcine FJ807811 Au32 G[9] Human AB045372
4 G[5] Porcine FJ807812 F45 G[9] Human AB180970
8-1 G[5] Porcine FJ807813 116E G[9] Human L14072
8-2 G[5] Porcine FJ807814 95H115 G[9] Human AB045373
16 G[5] Porcine FJ807815 97CM108 G[9] Human AY866504
19 G[5] Porcine FJ807816 MW69 G[9] Human AJ250545
24 G[5] Porcine FJ807817 N23 G[9] Human AJ491177
25-1 G[5] Porcine FJ807818 3710CM G[9] Human AY816184
25-2 G[5] Porcine FJ807819 US1205 G[9] Human AF060487
47-1 G[5] Porcine FJ807820 US321 G[9] Human AJ250275
47-2 G[5] Porcine FJ807821 BS1414/02 G[9] Human DQ822599
49 G[5] Porcine FJ807822 6222LP G[9] Human AF529871
52 G[5] Porcine FJ807823 PH301 G[9] Human AJ491184
53 G[5] Porcine FJ807824 BD524 G[9] Human AJ250543
57 G[5] Porcine FJ807825 R136 G[9] Human AF438228
57-1 G[5] Porcine FJ807826 Bulumkutu G[9] Human AF359358
61-1 G[5] Porcine FJ807827 3298CM G[9] Human DQ647423
63-1 G[5] Porcine FJ807828 MD28 G[9] Human AB297791
71 G[5] Porcine FJ807829 CAU202 G[9] Human EF059922
71-1 G[5] Porcine FJ807830 KNIH-13 G[9] Human DQ990319
VP7 KUMS04-102 G[9] Human DQ056300 VP7 06-44-2 G[9] Porcine FJ807874
E192 G[9] Human EU708592 06-52-1 G[9] Porcine FJ807875
E205 G[9] Human EU708591 06-121 G[9] Porcine FJ807876
L865 G[9] Human EU708599 06-235 G[9] Porcine FJ807877
L880 G[9] Human EU708601 06-285 G[9] Porcine FJ807878
CMP003 G[9] Porcine AY707787 1 G[9] Porcine FJ807870
97'SZ G[9] Human EU486975 2 G[9] Porcine FJ807871
OM46 G[9] Human AJ491181 B223 G[10] Bovine X57852
OM67 G[9] Human AJ491179 YM G[11] Porcine M23194
Hokkaido-14 G[9] Porcine AB176677 L26 G[12] Human M58290
JP3-6 G[9] Porcine AB176678 L338 G[13] Equine D13549
JP13-3 G[9] Porcine AB176679 FI23 G[14] Equine M61876
JP16-3 G[9] Porcine AB176680 Hg18 G[15] Bovine AF237666
JP29-6 G[9] Porcine AB176681 EW G[16] Murine U08430
JP32-4 G[9] Porcine AB176682 Ty1 G[17] Turkey D82980
JP35-7 G[9] Porcine AB176683 PO-13 G[18] Pigion D82979
T203 G[9] Human AY003871 02V0002G3 G[19] Chicken FJ169859
K-1 G[9] Human AB045374 Ecu534 G[20] Bovine Ecu805775
99-Sp1904 G[9] Human AB091754 Azuk-1 G[21] Bovine AB454421
06-22-1 G[9] Porcine FJ807872 Tu-03V0002E10 G[22] Turkey EU486973
06-42-2 G[9] Porcine FJ807873 HUN G[23] Pheasant FN393056