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. 2019 Jan 29;230:178–186. doi: 10.1016/j.vetmic.2019.01.020

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Fig. 2 — Recombination events in the genome of strain I0636/16. Simplot analysis to detect recombination and estimate recombination breakpoints within the I0636/16 genome (A). Complete genomic sequence of the strain GX-YL9 was used as the query sequence in SimPlot analysis. Vertical dotted lines show the deduced recombination breakpoint. Phylogenetic trees constructed using different nucleotide fragments based on the results of SimPlot analysis (B).