Table 1.
Patient | Species | Sexa | Age (yrs) | Lesion | Tissue Typeb | Location | Comments | Raw read count |
---|---|---|---|---|---|---|---|---|
OSCC1 | Feline | MC | 15 | FOSCC | FFPE | Gingiva | N/A | 5,739,653 |
OSCC2 | Feline | MC | 17 | FOSCC | FFPE | Gingiva | N/A | 7,513,118 |
OSCC3 | Feline | MC | 14 | FOSCC | FFPE | Tongue | N/A | 7,096,542 |
OSCC4 | Feline | MC | 11 | FOSCC | FFPE | Gingiva | N/A | 6,687,626 |
OSCC5 | Feline | MC | 15 | FOSCC | FFPE | Gingiva | N/A | 4,291,620 |
OSCC6 | Feline | FS | 17 | FOSCC | FFPE | Gingiva | N/A | 6,882,619 |
OSCC7 | Feline | FS | 16 | FOSCC | FFPE | N/A | N/A | 5,772,965 |
OSCC8 | Feline | MC | 14 | FOSCC | FFPE | Gingiva | N/A | 24,800,351 |
OSCC9 | Feline | MC | 18 | FOSCC | FFPE | Gingiva | N/A | 5,155,381 |
OSCC10 | Feline | MC | 16 | FOSCC | FFPE | Gingiva | N/A | 6,325,271 |
OSCC11 | Feline | MC | 14 | FOSCC | FFPE | Tongue | N/A | 6,165,815 |
OSCC12 | Feline | FS | 19 | FOSCC | FFPE | N/A | N/A | 7,099,389 |
OSCC13 | Feline | FS | 16 | FOSCC | FFPE | Tongue | N/A | 6,733,059 |
OSCC14 | Feline | FS | 15 | FOSCC | FFPE | N/A | N/A | 6,403,217 |
OSCC15 | Feline | MC | 18 | FOSCC | FFPE | Gingiva | N/A | 7,474,897 |
OSCC16 | Feline | FS | 12 | FOSCC | FFPE | Gingiva | N/A | 9,158,237 |
OSCC17 | Feline | FS | 14 | FOSCC | FFPE | Gingiva | N/A | 6,639,860 |
OSCC18 | Feline | FS | 15 | FOSCC | FFPE | Gingiva | N/A | 3,732,410 |
OSCC19 | Feline | FS | 11 | FOSCC | FFPE | Tongue | N/A | 6,354,314 |
OSCC20 | Feline | FI | 14 | FOSCC | FFPE | Tongue | N/A | 7,086,469 |
N1 | Feline | FS | Adult | Normal | FF | Gingiva and tongue | Surrendered. Euthanized due to complications associated with chronic kidney disease. FeLV/FIV negative on SNAP test. | 27,638,607 |
N2 | Feline | FS | Adult | Normal | FF | Gingiva and tongue | Healthy stray cat. FeLV+/FIV- on SNAP test. Confirmatory testing not done. Euthanized due to diagnosis of FeLV. | 27,740,803 |
N3 | Feline | MI | Adult | Stomatitis | FF | Gingiva and tongue | Healthy stray cat. FIV+/FeLV- on SNAP test. Confirmatory testing not done. Euthanized due to diagnosis of FIV. | 21,060,857 |
N4 | Feline | FS | 6 | Normal | FF | Gingiva and tongue | Euthanized due to leukemia. FeLV/FIV - on SNAP test | 19,796,205 |
N5 | Feline | N/A | Adult | Normal | FF | Gingiva and tongue | Stray cat. Death due to trauma. FeLV/FIV status unknown. | 20,603,477 |
N6 | Feline | FS | Adult | Normal | FF | Gingiva and tongue | Euthanized due to endocarditis. FeLV/FIV - on SNAP test | 49,712,932 |
N7 | Feline | FS | Adult | Normal | FF | Gingiva and tongue | Euthanized due to suspected FIP. Presumptive diagnosis based on macroscopic necropsy. FeLV/FIV status unknown. | 21,198,071 |
N8 | Feline | MC | 5 | Normal | FF | Gingiva and tongue | Euthanized due to pulmonary hypertension from angiomatosis. FeLV/FIV - on SNAP test | 32,636,457 |
N9 | Feline | N/A | Adult | Normal | FF | Gingiva and tongue | Stray cat. Euthanized due to large ulcerative lesion on nasal planum. Suspect squamous cell carcinoma. FeLV/FIV status unknown. | 20,714,975 |
PV1 | Feline | MC | 12 | Sarcoid, less likely sarcoma | FFPE | Pinna | N/A | 5,695,092 |
PV2 | Canine | FI | 2 | Papilloma | FFPE | Skin | Identified as CPV-6 on ViroCap | 24,972,777 |
PV3 | Canine | MI | 5 | Papilloma | FFPE | Lip | Identified as CPV-1 on ViroCap | 23,334,663 |
PV4 | Canine | MC | N/A | Papilloma | FFPE | Tongue | Identified as CPV-1 on ViroCap | 21,799,472 |
PV5 | Equine | MC | 8 | Sarcoid | FFPE | Skin | Identified as BPV-1 on ViroCap | 9,292,084 |
PV6 | Feline | FS | 2 | Papilloma | FFPE | Oral | N/A | 4,631,420 |
PV7 | Feline | FS | 18 | Papilloma | FFPE | Oral | N/A | 5,848,794 |
PV8 | Feline | MC | 13 | Sarcoid | FFPE | Skin | N/A | 6,658,664 |
FS (female spayed), FI (female intact), MC (male castrated) or MI (male intact).
Formalin fixed paraffin embedded (FFPE) or fresh frozen (FF).