Table 1.

Published proteome microarrays

Organism	Published year/PI	Proteins	Applications
Expression based
Yeast	2001/M. Snyder [5]	5800	Interactions: protein–protein, protein–phospholipids [5]; protein–DNA [53]; phosphorylation network [30]; glycosylation [6,27].
	2005/M. Snyder [27]	5854
Arabidopsis	2005/B. Kersten [19]	1690	Phosphorylation [19]; protein–protein interaction [54,55]; PDI/transcriptional network [56].
	2007/S.P. Dinesh-Kumar [54,55]	1133
	2008/X.W. Deng [56]	802
SARS -CoV	2006/M. Snyder [57]	100% of SARS-CoV and the majority of five other CoVs	Serum biomarker identification for SARS-CoV diagnostics [57].
E. coli	2008/H. Zhu [20]	4256	DNA repair protein identification [20]; inflammation bowel disease (IBD) biomarker screening [58].
Human	2005/ProtoArray® V1.0	>1000	Serum profiling [59]; kinase substrate and inhibitor screening [60]; ubiquitination and sumoylation [61].
	2010/ProtoArray® V5.0	>9000
IVTT based
Vaccinia	2005/P.L. Felgner [32,33]	185	Serum biomarker identification for diagnostics and vaccination.
E. coli	2006/H. Yanagawa [62]	4337	Protein–protein interaction.
Francisella tularensis	2007/P.L. Felgner [63]	1741	Serum biomarker identification for diagnostics and vaccination.
Coxiella burnetii	2008/P.L. Felgner [64]	1988	Serum biomarker identification for diagnostics and vaccination.
P. falciparum	2008/P.L. Felgner [65]	250	Serum biomarker identification for diagnostics and vaccination.
Burkholderia pseudomallei	2009/P.L. Felgner [66]	1205	Serum biomarker identification for diagnostics and vaccination.
Chlamydia trachomatis	2010/L.M. de la Maza [67]	225	Serum biomarker identification for diagnostics and vaccination.
C. albicans	2010/H.P. Liu [35]	336	Serum biomarker identification for diagnostics and vaccination.
Brucella melitensis	2010/P.L. Felgner [68]	1406	Serum biomarker identification for diagnostics and vaccination.
M. tuberculosis	2010/M.L. Gennaro [34]	4099	Serum biomarker identification for diagnostics and vaccination.