Table 2.
Comparison of eQTL Mapping Results between GENOA and Geuvadis
| Genes (or Gene-SNP Pairs) Analyzed in Both Studies | Detected in Geuvadis | Detected in GENOA | Overlapped between the Two Studies | |
|---|---|---|---|---|
| GENOA AA (n = 1,205) versus Geuvadis YRI (n = 89) | ||||
| eGenes | 10,539 | 416 | 4,608 | 337 |
| eSNPs | 51,611 | 7,791 | 29,051 | 6,545 |
| GENOA EA (n = 801) versus Geuvadis EUR (n = 373) | ||||
| eGenes | 11,130 | 2,800 | 3,947 | 1,831 |
| eSNPs | 331,784 | 159,262 | 156,027 | 101,010 |
The first row shows the number of eGenes that are identified in GENOA AA and analyzed in Geuvadis YRI (first column), the number of eGenes in AA that are also eGenes in Geuvadis YRI (second column), the percentage of also eGenes in Geuvadis YRI that are also eGenes in AA (third column), the number of eGenes that are identified in GENOA EA and analyzed in Geuvadis EUR (first column), the number of eGenes in EA that are also eGenes in Geuvadis EUR (second column), the percentage of also eGenes in Geuvadis EUR that are also eGenes in EA (third column).