Table 2.
List of the PIGK Variants Identified in the Subjects Included in the Study
Family | Genomic Variant (hg19) | DNA Variant (RefSeq: NM_005482.3) | Protein Variant | Inheritance | gnomAD Minor Allele Frequency (no homozygotes found for any variant) |
---|---|---|---|---|---|
1 | chr1:g.77620297A>G | c.823T>C | p.Cys275Arg | compound heterozygous | 0 |
1 | chr1:g.77672406G>A | c.158C>T | p.Ser53Phe | compound heterozygous | 0 |
2 | chr1:g.77635060G>A | c.260C>T | p.Ala87Val | homozygous | 0.000004129, highest 0.000008978 (European non-Finnish population) rs772948495 |
3 | chr1:g.77632412T>G | c.479A>C | p.Tyr160Ser | compound heterozygous | 0.00001504, highest 0.00004152 (African population) |
3 | chr1:g.77676171G>A | c.97C>T | p.Gln33∗ | compound heterozygous | 0 |
4 | chr1:g.77632412T>G | c.479A>C | p.Tyr160Ser | compound heterozygous | 0.00001504, highest 0.00004152 (African population) |
4 | chr1:g.77676175C>G | c.94-1G>C | splice site | compound heterozygous | 0 |
5 | chr1:g.77632412T>G | c.479A>C | p.Tyr160Ser | homozygous | 0.00001504, highest 0.00004152 (African population) |
6 | chr1:g.77635063A>G | c.257T>C | p.Leu86Pro | homozygous | 0 |
7 | chr1:g.77629564G>A | c.551C>T | p.Ala184Val | compound heterozygous | 0.000004011, highest 0.000008837 (European, non-Finnish) |
7 | chr1:g.77627056A>T | c.737T>A | p.Met246Lys | compound heterozygous | 0 |
8 | chr1:g.77635058C>T | c.262G>A | p.Asp88Asn | homozygous | 0.0000124, highest 0.0001071 (South Asian population) |
9 | chr1: g.77635058C>T | c.262G>A | p.Asp88Asn | homozygous | 0.0000124, highest 0.0001071 (South Asian population) |