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. 2020 Mar 27;11:353. doi: 10.3389/fpls.2020.00353

TABLE 1.

Genomic prediction accuracies for chickpea GEBVs across environments with various training and test sets estimated using 10-fold cross-validation.

All predict all Desi predict Desi Kabuli predict Kabuli Desi predict Kabuli Kabuli predict Desi
Seed yield 0.48 (0.015)a 0.26 (0.029) 0.25 (0.020) 0.08b 0.04c
Seed weight 0.92 (0.002) 0.76 (0.012) 0.74 (0.014) 0.20 0.58
Biomass 0.50 (0.013) 0.39 (0.019) 0.26 (0.026) 0.11 0.16
Plant height 0.65 (0.011) 0.75 (0.010) 0.42 (0.038) –0.13 0.16
Days to flower 0.68 (0.007) 0.63 (0.016) 0.56 (0.031) –0.34 0.07
Days to maturity 0.70 (0.003) 0.53 (0.021) 0.53 (0.038) –0.16 0.09

aMean prediction accuracy of the Pearson correlation between unobserved BLUPs and observed BLUEs. Standard deviation of ten replicates is shown in parentheses. bAll Desi lines used to predict all Kabuli lines (no cross-validation). cAll Kabuli lines used to predict all Desi lines (no cross-validation).