Table 2.
Oligonucleotide microarray probes used in this study.
| Pathogen | Name | Sequence (5′ → 3′) | Target strains |
|---|---|---|---|
| CDV | CDVG | CCCATTTAGACTAACTACCAAGGGTA | Generic |
| CDVW1 | TTCACTGTKACCCCYCAT | Wild type strains in Taiwan, Japan, South Korea and China | |
| CDVW2 | CCAGGGAGTCGAGTGGAA | Wild type strains in Japan and South Korea that CDVW1 cannot bind | |
| CDVW3 | TCATCGAGTCCAATGTAG | Wild type strains in China that CDVW1 cannot bind | |
| CDVV1 | ACATATCACGAAGTGATCATGCGA | CDV traditional vaccine strains (Onderstepoort, Distemperoid, Lederle and BA strains) | |
| CDVV2 | GGAAGATTTCTTTTACGTAC | CDV contemporary vaccine strain (N-CDV strain) | |
| Influenza virus | IVG | CAGGCCCCCTCAAAGCCGAGAT | Generic |
| CHV | CHVG | GAAGTTGATGCCAGATCTGTTTATCC | Generic |
| B. bronchiseptica | Bb | ACGGACGCCTGTCCCCGCAGGAA | B. bronchiseptica |
| M. cynos | Mc | GAGAGAACTTTTTTTCTCTCATGTTC | M. cynos |