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. Author manuscript; available in PMC: 2020 Apr 3.
Published in final edited form as: Pac Symp Biocomput. 2020;25:55–66.

Table 1:

Overview of dataset samples.

Disease Count Site Studies
Atopic Dermatitis (AD) 38 Skin Chng13
Adenoma 143 Stool Thomas,7 Feng,14 Hannigan,15 Zeller16
Bronchitis 18 Stool Yassour17
C. difficile Infection (CDI) 33 Stool Vincent18
Colorectal Cancer (CRC) 273 Stool Vogtmann,2 Yu,19 Feng,14 Zeller,16 Hannigan15
Fatty Liver 94 Stool Loomba,20 Feng14
Hepatitis B Virus (HBV) 99 Stool Qin21 (2014)
Healthy 3808 All 25 Studies
Hypertension 169 Stool Thomas,7 Feng,14 Li22
Inflammatory Bowel Disease (IBD) 148 Stool Nielsen23
Impaired Glucose Tolerance (IGT) 49 Stool Karlsson24
Infectious Gastroenteritis 20 Stool David,25 Yassour17
Metabolic Syndrome 50 Stool Vrieze26
Otitis 107 Stool Yassour17
Periodontitis 48 Oral Shi27
Psoriasis 74 Skin TettAJ28
Rheumatoid Arthritis (RA) 194 Stool Chengping29
Type 1 Diabetes (T1D) 55 Stool HeintZ-Buschart,30 Kostic31
Type 2 Diabetes (T2D) 223 Stool Qin32 (2012), Karlsson24