Table 2.

Total number of sequence reads generated and aligned sequence pairs from H. irregulare and H. occidentale liquid cultures and 2, 4, and 6 weeks infected Norway spruce bark.

Samples names*	Total reads	Aligned pairs	Mapped pairs (%)
TC32-1-L-rep1	11809378	9114879	77.2
TC32-1-L-rep2	10555531	8764947	83.0
TC32-1-L-rep3	13240830	11124807	84.0
TC32-1-2w-rep1	39748040	1148233	2.9
TC32-1-2w-rep2	43180655	1637664	3.8
TC32-1-2w-rep3	40750502	1282462	3.1
TC32-1-4w-rep1	121996688	583954	0.5
TC32-1-4w-rep2	49434129	1241663	2.5
TC32-1-4w-rep3	95247997	3219921	3.4
TC32-1-6w-rep1	58357874	229570	0.4
TC32-1-6w-rep2	53266103	681649	1.3
TC32-1-6w-rep3	55675183	975852	1.8
TC122-12-L-rep1	13661132	11135225	81.5
TC122-12-L-rep2	12389419	10207752	82.4
TC122-12-L-rep3	11098200	9092986	81.9
TC122-12-2w-rep1	30863928	6764247	21.9
TC122-12-2w-rep2	39222132	1928245	4.9
TC122-12-2w-rep3	33431531	2346657	7.0
TC122-12-4w-rep1	154786107	1519679	1.0
TC122-12-4w-rep2	78321161	1714337	2.2
TC122-12-4w-rep3	32287019	4234747	13.1
TC122-12-6w-rep1	30472557	5817262	19.1
TC122-12-6w-rep2	73805957	3078694	4.2
TC122-12-6w-rep3	142671388	3277956	2.3

H. irregulare = TC32-1 and H. occidentale = TC122-12; L = liquid culture, 2 w, 4 w and 6 w = 2, 4, and 6 weeks after inoculating Norway spruce bark with the fungus; rep1, rep2 and rep3 = replicate 1, 2, and 3.