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. 2020 Mar 20;22(3):e16810. doi: 10.2196/16810

Table 1.

Breakdown of data elements for registry/Observational Medical Outcomes Partnership.

Gold Standard EHRa Registry field OMOP table.column
Gender Sex person.gender_concept_id
Ethnicity Spanish Origin person.ethnicity_concept_id 
Race Race person.race_concept_id
Date of Diagnosis Date of Diagnosisb condition_occurrence. condition_start_date
Basis of Diagnosis  Dx Confimation DX Staging/Proc Summb procedure_occurrence. procedure_occurrence_id
Cancer Site Cancer Site ICD-0-3 SEERc Site Group condition_occurrence. condition_concept_id
Cancer Histology/Morphology Cancer Histology (ICD-0-3) condition_occurrence. condition_concept_id
Therapeutic Agent/Modality Text/Code of Chemo At Hospitalb drug_exposure. drug_concept_id
Beginning and End Dates of Treatment Chemo Start Date/Chemo End Dateb drug_exposure. drug_exposure_start_date/drug_exposure. drug_exposure_end_date

aEHR: electronic health record.

bIndicates that the field is listed but no or incomplete information was populated (ie, “suspense” registry cases).

cSEER: Surveillance, Epidemiology, and End Results.