Table 1.

Clean reads quality metrics.

Sample	Toatal Raw Reads (Mb)	Total Clean Reads (Mb)	Total Clean Bases (Mb)	Clean Reads Q20 (%)	Clean Reads Q20 (%)	Clean Reads Ratio (%)
CPD1	74.58	65.66	6.57	96.70	87.91	88.04
CPD2	72.12	65.65	6.57	97.18	89.16	91.03
CPD3	74.55	65.99	6.60	96.81	88.19	88.52
CPD4	74.59	66.26	6.63	96.81	88.21	88.82
TPD1	74.58	65.50	6.55	97.03	88.91	87.83
TPD2	72.08	65.16	6.52	97.24	89.52	90.40
TPD3	68.50	60.96	6.10	96.82	88.33	88.99
TPD4	74.61	67.25	6.73	97.18	89.35	90.14
TPD5	77.04	65.93	6.59	96.85	88.44	85.58
TPD6	79.57	66.89	6.69	96.83	88.52	84.07