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. 2010 May 31;30(1):21–45. doi: 10.1016/j.cll.2009.11.001

Table 3.

Differential diagnosis of diarrhea in patients with suspected STEC

Pathogen Incubation Period Blood in Stool Abdominal Cramping and Pain Nausea or Vomiting Fever Other Signs and Diagnostic Aids Diagnostic Laboratory Testing
Bacillus anthracis (gastrointestinal anthrax) 2 d to wk + + + + Patient history: exposure may be accidental from consumption of infected meat Culture of food, any lesions, blood; CDC select agent; culture hazard
Brucella spp 7–21 d + + Patient history: bacteremia and fever; unpasteurized dairy product consumption; travel to endemic area; muscle and joint pain; headache Blood cultures with special incubation request; CDC select agent; culture hazard
Campylobacter spp 2–5 d +/− + + + Consumption of or contact with raw or undercooked poultry Stool culture (special request)
Clostridium difficile (C difficile associated disease); Community-associated C difficile associated disease Variable (d to mo) +/− + +/− + May occur in patients with or without prior antibiotic use Stool toxin EIA; anaerobic stool culture and toxin EIA of isolates
Cryptosporidium spp 2–28 d + + + May be chronic in ICH Microscopic stool examination; DFA; EIA
Cyclospora spp 1–11 d + + Fatigue; may be chronic if unrecognized Microscopic stool examination
EIEC 10–18 h − early; <10% + late + + Fecal leukocytes late, as seen with Shigella spp Stool culture for other pathogens
Entamoeba histolytica 2 d–4 wk + + + Invasive; liver abscess if chronic; may be confused with STEC; patient food and exposure history very important Microscopic stool examination; serology for chronic or invasive disease; stool EIA or PCR
EPEC 9–12 h +/− + + + Infant diarrhea; mucus in stool; dehydration severe; prolonged infections Stool culture for other pathogens
ETEC 1–3 d + Patient history useful (travel, infant weaning) Stool culture for other pathogens
Giardia spp 1–4 wk + Flatulence, bloating; may be chronic if unrecognized O&P stool examination; stool DFA or EIA
Norovirus 24–48 h + Outbreak settings common; most common viral cause of gastroenteritis PCR testing of stool
Rotavirus 1–3 d + +/− Common in children; outbreak settings Stool EIA for rotavirus
Salmonella enterica subsp. enterica; 2500 serovars; nontyphoidal 1–3 d +/− + + May be chronic if not recognized or untreated Stool culture
Shigella spp 1–2 d + + + + S dysenteriae serotype 1 especially severe due to Shiga toxin; all Shigella are invasive of intestinal epithelium Stool culture (special request for S dysenteriae serotype 1)
STEC, O157 or non-O157 (EHEC, VTEC) 1–8 d +/− + + +/− Nonbloody diarrhea may precede blood in stool; oliguria, renal failure, hemolytic uremic syndrome; history of undercooked beef consumption Stool culture to include SMAC agar for O157 STEC (special request); Shiga toxin EIA; O157 EIA; PCR testing of stool for Stx genes
Toxins, bacterial, preformed: Bacillus cereus, Clostridium botulinum, Clostridium perfringens, Staphylococcus aureus 1–16 h Bc; 12–72 h Cb; 8–16 h Cp; 1–6 h Sa + + −/+ Sudden onset vomiting with Sa; diplopia and muscle paralysis with Cb; Cb is life-threatening Toxin testing of food
Toxins: fish, shellfish, and mushrooms <30 min to 8 h + + +/− Visual disturbance, confusion, numbness, altered sensations; may be life-threatening Toxin testing of food
Toxins, chemical: organic compounds, metals (As, Sn, Tl, Zn), nitrite, fluoride 5 min to 8 h + + Headache, nervousness, twitching movements, visual disturbance Toxin testing of food
Trichinella spp 1 d–8 wk + + + Myalgias, periorbital edema; cardiac and neurological involvement possible Larval cysts detectable in muscle tissue by microscopy
Vibrio cholerae, serogroup 01 or 0139 1–3 d + Profuse watery diarrhea; dehydration life-threatening Stool culture (special request)
Vibrio para-hemolyticus, V mimicus, V fluvialis, V furnissii, V hollisae 2–48 h +/− + + + Patient history of seafood consumption Stool culture (special request)
Yersinia enterocolitica and pseudotuberculosis 24–48 h +/− +/− + + Mesenteric lymphadenitis mimicking appendicitis Stool culture (special request)

Symbols used: + usually present; +/− may be present; − rarely present.

Abbreviations: DFA, direct fluorescent antibody staining; EIA, enzyme immunoassay; ICH, immunocompromised host; Bc Cb Cp Sa (for toxins, bacterial, preformed) are Bacillus cereus, Clostridium botulinum, Clostridium perfringens, and Staphylococcus aureus, respectively; O&P, ova and parasite; PCR, polymerase chain reaction; SMAC, sorbitol-Mac Conkey.

Adapted from Centers for Disease Control and Prevention. Diagnosis and management of foodborne illnesses: a primer for physicians and other health care professionals. MMWR Morb Mortal Wkly Res 2004;53:1–33. Additional data from Refs. 3, 4, 51